Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  149 bits (376), Expect = 2e-40
 Identities = 122/455 (26%), Positives = 215/455 (47%), Gaps = 50/455 (10%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQ-----L 78
           +L+IDD++DVL S   L+           +P +    +  +   ++LLDM   Q      
Sbjct: 9   ILVIDDNEDVLFSAKMLLRKHAREVVMEKNPKKIPFLLSNEDFDLILLDMNFSQDITSGQ 68

Query: 79  HGMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLE 138
            G   LK++   D    V++IT +GD+ MAV+A+K GA DF+ KP    +LL  +     
Sbjct: 69  EGFYWLKEVLKYDPSAVVVMITAYGDVEMAVKALKEGATDFVLKPWQNEKLLATLSAAAR 128

Query: 139 LRRSFIEQKLLLS---------RSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESG 189
           LR S+ E   L            S K  + G+S  M  + S + + A  +  ++++GE+G
Sbjct: 129 LRHSYQEVSRLREANRTLSTQLHSGKDIIQGESKAMRHLFSIIDKVAKTDADILLLGENG 188

Query: 190 CGRHTIAYLIHQ---------LTTNNGHLPWV----ELVASAKTEWSTVEP----KVQES 232
            G+  IA  +H+         +T + G +       EL    K  ++  +     +++ +
Sbjct: 189 TGKEVIARALHERSSRADKVFVTVDMGAITESLFESELFGHKKGAFTDAKEDRVGRIEAA 248

Query: 233 AGGTLLIDHIELLSEEVQRNVVQSLLNQERL----NRP---RTRVIAVIDQPPEQLIAQN 285
            GGTL +D I  LS  +Q  ++  L  +E +    N+P     R+I   + P ++++ + 
Sbjct: 249 NGGTLFLDEIGNLSPAMQAKLLTVLQRREIIKVGTNKPVPVNVRLICATNMPLKEMVQRG 308

Query: 286 QLLPELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAH 345
           +   +L Y +N  ++ +P LR R DD+     +FL+    K  +P+  +    LA L+++
Sbjct: 309 EFRQDLLYRINTVELQLPPLRSRQDDLPLFAAHFLQVYAVKYKQPVKRLSDAALARLKSY 368

Query: 346 QWPGNVRELRNVAELYAI----------GIVKLAGKERLYNQEEMLSPLDELVDDYEKQV 395
            WPGNVREL++  E  +I              LA +E +         LD  +D+ E++ 
Sbjct: 369 SWPGNVRELQHALERASIMSDNRELQPDDFFFLAEEEAVEASAVSAQSLD--LDELEREA 426

Query: 396 IEDALFLFSGRVADAANYLQVPRKKLYLRMKKHGL 430
           ++ AL    G ++ AA  L + R  LY R++K+ L
Sbjct: 427 VQRALQKHEGNISKAAKELGLSRGALYRRLEKYEL 461