Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., response regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  140 bits (353), Expect = 7e-38
 Identities = 104/367 (28%), Positives = 172/367 (46%), Gaps = 29/367 (7%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           +L+IDD++ +  +   ++     T     D  + +  +      VVL D+ MP + G+E+
Sbjct: 4   ILIIDDERAIRSTLKEILEFENYTVDEAEDGEKGLQLLGKSKYDVVLCDIKMPGMDGIEV 63

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           L++   V    P I+I+ HG I  AVEA K GA DFL+KP +  +LL  ++  L+     
Sbjct: 64  LEKAMEVTPDSPFIMISAHGTIDTAVEATKKGAYDFLQKPPDLNRLLVTVRNALDKSHLV 123

Query: 144 IEQKLLLSRSVKR-ELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQL 202
            E K+L  +  K  E+VG S  + +++  + + A  +  V+I G +G G+  +A  IH+ 
Sbjct: 124 TETKILKKKISKTYEMVGNSPALSRVKQAIEKVAPTDARVLITGPNGSGKELVARAIHE- 182

Query: 203 TTNNGHLPWVELVASA--------------KTEWSTVEP----KVQESAGGTLLIDHIEL 244
            +N  + P VE+  +A              K  +++       K +++ GGTL +D +  
Sbjct: 183 NSNRSNGPLVEVNCAAIPSELIESELFGHEKGSFTSAVKQRIGKFEQANGGTLFLDEVGD 242

Query: 245 LSEEVQRNVVQSLLNQERLNR--------PRTRVIAVIDQPPEQLIAQNQLLPELYYLLN 296
           +S   Q  V+++ L + ++ R           RV+A  ++   + I       +LY+ L 
Sbjct: 243 MSLSAQAKVLRA-LQEHKITRVGGDKDIQVDVRVVAATNKNLLEEIEAKNFREDLYHRLG 301

Query: 297 QGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELRN 356
              I VP L  R +DI  L   FL       G     + P  L  L+   W GNVRELRN
Sbjct: 302 VILIHVPPLNDRREDIPDLVQKFLNDIANDYGNKPKTITPEALEYLKELDWRGNVRELRN 361

Query: 357 VAELYAI 363
           V E   I
Sbjct: 362 VVERLVI 368