Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., sigma-54-dependent Fis family transcriptional regulator from Pontibacter actiniarum KMM 6156, DSM 19842

 Score =  157 bits (398), Expect = 5e-43
 Identities = 124/463 (26%), Positives = 218/463 (47%), Gaps = 54/463 (11%)

Query: 18  SKMKSTVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMP- 76
           +K+   +L++DD++D+L +   L+     T K   DP +    +Q     VVLLDM    
Sbjct: 2   NKVPCKILVVDDEEDILMAGKLLLKQHFETVKTSSDPYKIPGLLQEYGFDVVLLDMNYST 61

Query: 77  ----QLHGMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTL 132
                  G   LKQI  +  K  VI++T +GDI +AV+A+K GA DF+ KP    +L+ +
Sbjct: 62  GATSSKEGFHWLKQILQLSPKTTVILMTAYGDIELAVKALKEGASDFVLKPWQNDKLVAI 121

Query: 133 IKQHLELRRSFIEQKLLLSRSVKRE-----LVGKSAQMEQIRSHVAQYALLNRHVVIVGE 187
           +K   + R    ++    +            +G S  M+++   + + A  + +V+I+GE
Sbjct: 122 LKTACQNRSGVSKRSAEKTEQENTAYHYDGFIGVSPAMQRVYQTLDKVAATDANVLILGE 181

Query: 188 SGCGRHTIAYLIHQLTTNNGH-------------LPWVELVASAKTEWSTVEP----KVQ 230
           +G G+   A  +H+ +   G              L   EL   AK  ++  +     +++
Sbjct: 182 NGTGKEVAARALHRKSKRAGSVFEKVDLGAVSETLFESELFGHAKGAFTDAKEERAGRLE 241

Query: 231 ESAGGTLLIDHIELLSEEVQRNVVQSLLNQERL----NRPRT---RVIAVIDQPPEQLIA 283
            ++GGTL +D I  LS  +Q  ++  L +++ +    N+PR    R++   + P  +++ 
Sbjct: 242 AASGGTLFLDEIGNLSPALQAKLLTVLQSRQVIRLGTNKPRPIDIRLVCATNMPLYEMVR 301

Query: 284 QNQLLPELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLR 343
           +     +L Y +N  +I +P LR+R +DI  L  +FLK    K G+P  ++    +  L 
Sbjct: 302 EGSFRQDLLYRINTVEIHLPPLRERREDIKLLADHFLKVYRQKYGRPQLHLGADTMRRLN 361

Query: 344 AHQWPGNVRELRNVAELYAIGIVKLAGKERLYNQE----------------EMLSPLDEL 387
            + WPGN+REL +  E   I    L     L+  +                E ++  D  
Sbjct: 362 EYHWPGNIRELDHAMERAVI----LCDGNELHPDDFYFAPSENGQQKKQGLESITESDYT 417

Query: 388 VDDYEKQVIEDALFLFSGRVADAANYLQVPRKKLYLRMKKHGL 430
           ++  EK +++ AL   SG +  AA  L + R  LY R++KHGL
Sbjct: 418 LEALEKMMVQKALVKHSGNITHAAKELGITRTALYRRIEKHGL 460