Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  162 bits (410), Expect = 2e-44
 Identities = 128/464 (27%), Positives = 221/464 (47%), Gaps = 48/464 (10%)

Query: 20  MKSTVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMP--Q 77
           M   +L++DD+ D+      ++   G   +   +  +A+  I+     +V+ D+++   +
Sbjct: 1   MAHDILIVDDEADIRALIAGILEDEGHNTREAANSDEALEGIRARRPNLVIQDIWLQGSR 60

Query: 78  LHGMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHL 137
           L G+E+L  IK  + ++PV++I+GHG+I  AV+A+K GA DF+EKP    +LL ++++ +
Sbjct: 61  LDGLEVLDAIKRDNPEVPVVMISGHGNIETAVQAIKQGAYDFIEKPFKADRLLLVVERAV 120

Query: 138 ELRRSFIEQKLLLSRSVK-RELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIA 196
           E  R   E + L  RS    ELVG +  + Q+R  V +    N  V+I G +G G+  +A
Sbjct: 121 EAARLRRENEELRLRSGSGGELVGNAVGILQVRQAVEKVGPTNSRVLITGPAGSGKEVVA 180

Query: 197 YLIHQLTTNNGHLPWVELVASAK-----------TEWSTVEP-------KVQESAGGTLL 238
             IH   +     P+V L  +A            TE     P         +++ GGTLL
Sbjct: 181 RQIH-ARSRRADGPFVVLNCAAMHPDRMEMELFGTEHGLDGPDSPRKVGTFEQAHGGTLL 239

Query: 239 IDHIELLSEEVQRNVVQSLLNQ--ERLNRPR-----TRVIAVIDQPPEQLIAQNQLLPEL 291
           +D +  +  E Q  +V+ L +Q  ER+   +      RVIA  ++  +  +       +L
Sbjct: 240 LDEVADMPLETQGKIVRVLQDQMFERIGGGKRVEVDVRVIASTNRDLQSEMTAGHFREDL 299

Query: 292 YYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNV 351
           YY LN   + +P LR R +DI  L  +F+  +    G     V    +A L+A+ WPGNV
Sbjct: 300 YYRLNVVPVKMPSLRDRREDIPLLARHFMTMAAAAAGVQPRMVGEDAMAALQAYDWPGNV 359

Query: 352 RELRNVAELY-------------------AIGIVKLAGKERLYNQEEMLSPLDELVDDYE 392
           R+LRNV +                      IG +  A      + E M  PL E  + +E
Sbjct: 360 RQLRNVMDWLLIMAPGDQREAIRADMLPGEIGAITPAVLRWEKSSEIMTLPLREARELFE 419

Query: 393 KQVIEDALFLFSGRVADAANYLQVPRKKLYLRMKKHGLEKDAFK 436
           ++ +   +  F+G ++  A ++ + R  L+ ++K  G+  D  K
Sbjct: 420 REYLLAQVNRFAGNISRTAAFVGMERSALHRKLKLLGVNTDEKK 463