Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., sigma-54-dependent Fis family transcriptional regulator from Magnetospirillum magneticum AMB-1

 Score =  208 bits (530), Expect = 2e-58
 Identities = 143/443 (32%), Positives = 226/443 (51%), Gaps = 36/443 (8%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           +L +DD++ +  +    + +AG     +  P  A+  +  D+ G+++ D+ MP L G+ L
Sbjct: 6   ILFVDDEEPMRIAVKQWLGLAGFDVTVLARPEGALGRLSRDFPGILVSDVRMPGLDGIGL 65

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           LK  +A D  +PVI++TGHGDIP+AVEA++ GA DF+EKP  P +L   + +  E RR  
Sbjct: 66  LKAAQAQDPDLPVILVTGHGDIPLAVEAMREGAYDFIEKPFAPERLAQAVGRACEKRRLV 125

Query: 144 IEQKLL----LSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLI 199
           +E + L        + R L+G S  ME +R+ V + A L  +VVI G++GCG+  +A  +
Sbjct: 126 LENRRLRALGAGDDMARRLIGPSQAMENVRAQVRELAPLPLNVVIFGDTGCGKELVARCL 185

Query: 200 HQLTTNNGHLPWVELVASA------KTEWSTVEP------------KVQESAGGTLLIDH 241
           H         P+V +  +A      ++E+   E             KV+ + GGTL +D 
Sbjct: 186 HDCGPRAAR-PFVAVNCAAIPETMFESEFFGHEAGAFTGAAQRRAGKVEHAHGGTLFLDE 244

Query: 242 IELLSEEVQRNVVQSLLNQERL------NRPRTRVIAVIDQPPEQLIAQ---NQLLPELY 292
           +E +   +Q  +++ L  QER       NR     + VI      L+A+    +   +LY
Sbjct: 245 VESMPLALQAKLLRVL--QERCIEPLGGNRTIPVDLRVITAAKADLLAEVRAGRFREDLY 302

Query: 293 YLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVR 352
           Y L+  +I +P L +R +DI ALF  F   +    G+  P +    +  L AH WPGNVR
Sbjct: 303 YRLHVAEIRLPPLAERREDIVALFESFAALAANAHGRTPPTLTEGNVQALLAHDWPGNVR 362

Query: 353 ELRNVAELYAIGIVKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVADAAN 412
           ELRN AE +A+G+   A        E     L   V  +E+Q IE A     G VA+   
Sbjct: 363 ELRNEAERFALGLGLRAAAP--VAAEAQGDGLQASVALFERQRIEAAFIQAQGDVAEVMR 420

Query: 413 YLQVPRKKLYLRMKKHGLEKDAF 435
            L +PR+ L  +M K+G+++  F
Sbjct: 421 LLDLPRRTLNEKMAKYGIDRRRF 443