Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 441 a.a., sigma-54-dependent response regulator transcription factor ZraR from Escherichia coli ECRC62

 Score =  149 bits (377), Expect = 1e-40
 Identities = 128/439 (29%), Positives = 212/439 (48%), Gaps = 40/439 (9%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           +L++DDD         L+   G          QA+  ++     +VL D+ M ++ G+  
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYNVALANSGRQALEQVREQVFDLVLCDVRMAEMDGIAT 67

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           LK+IKA++  IPV+++T +  +  AVEA+K GA D+L KP++   L   +++ L    S 
Sbjct: 68  LKEIKALNPAIPVLIMTAYSSVETAVEALKTGALDYLIKPLDFDNLQATLEKALAHTHSI 127

Query: 144 IEQKLLLSRSVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQ-- 201
             +   ++ S +  +VGKS  M+ + S +A  A     V+I G+SG G+  +A  IH   
Sbjct: 128 DAETPAVTAS-QFGMVGKSPAMQHLLSEIALVAPSEATVLIHGDSGTGKELVARAIHASS 186

Query: 202 -------LTTN----NGHLPWVELVASAKTEWSTVEPKVQ----ESAGGTLLIDHIELLS 246
                  +T N    N  L   EL    K  ++  + + +    E+ GGTL +D I  +S
Sbjct: 187 ARSEKPLVTLNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEIGDIS 246

Query: 247 EEVQRNVVQSLLNQE--RLNRPRT-----RVIAVIDQPPEQLIAQNQLLPELYYLLNQGQ 299
             +Q  +++++  +E  R+   +T     R+IA   +     +   +   +LYY LN   
Sbjct: 247 PMMQVRLLRAIQEREVQRVGSNQTISVDVRLIAATHRDLAAEVNAGRFRQDLYYRLNVVA 306

Query: 300 IDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELRNVAE 359
           I+VP LRQR +DI  L  +FL++   +  K +    P  + LL  + WPGN+REL N  E
Sbjct: 307 IEVPSLRQRREDIPLLVGHFLQRFAERNRKAVKGFTPQAMDLLIHYDWPGNIRELENAVE 366

Query: 360 LYAIGIVKLAGKERLYNQEEMLS------PLDELVD-----DYEKQVIEDALFLFSGRVA 408
                +V L G E +  +E  L+      PL +  D     + EK+VI  AL    G   
Sbjct: 367 R---AVVLLTG-EYISERELPLAIASTPIPLGQSQDIQPLVEVEKEVILAALEKTGGNKT 422

Query: 409 DAANYLQVPRKKLYLRMKK 427
           +AA  L + RK L  ++ +
Sbjct: 423 EAARQLGITRKTLLAKLSR 441