Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 460 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  161 bits (407), Expect = 5e-44
 Identities = 136/455 (29%), Positives = 221/455 (48%), Gaps = 51/455 (11%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQ-----L 78
           +L++DD++D+L +   L+           DP +    +  +   V+LLDM   +      
Sbjct: 9   ILIVDDNEDLLFAAKMLLKKYAKEVTIEKDPRRIPFLVNNNNYDVILLDMNFTEDTTSGK 68

Query: 79  HGMELLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLE 138
            G   LKQIK +D K  VI+IT  GD+ MAV+A+K GA DF+ KP    +LL  +     
Sbjct: 69  EGFHWLKQIKEIDPKAVVILITAFGDVEMAVQALKEGATDFILKPWQNEKLLATLSAASR 128

Query: 139 LRRSF-----IEQKLL-LSRSVKR---ELVGKSAQMEQIRSHVAQYALLNRHVVIVGESG 189
           L+ S+     I QK   L   +K+   E++G+S+ M+ I S + + A  + +V+I+GE+G
Sbjct: 129 LKESYDQVDNISQKSRQLQADMKKPFSEIIGQSSSMKNIFSIIDKVAQTDANVLILGENG 188

Query: 190 CGRHTIAYLIHQLTTNNGHL-PWVELVASAKTEWST---------VEPKVQESAG----- 234
            G+  IA  IH  +     +   V++ A  +T + +              ++ AG     
Sbjct: 189 TGKELIARAIHDRSLRRDEIFVGVDMGAITETLFESELFGHKRGAFTDAKEDRAGRFEVA 248

Query: 235 --GTLLIDHIELLSEEVQRNVVQSLLNQE--RLNRPRT-----RVIAVIDQPPEQLIAQN 285
             GTL +D I  LS  +Q  ++  L  +E  R+   ++     R+I   +     ++ +N
Sbjct: 249 DKGTLFLDEIGNLSMPLQSKLLTVLQKREVTRIGTNKSIPVDIRLICATNMKVHDMVMEN 308

Query: 286 QLLPELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAH 345
               +L Y +N  +I +P LR+R DDI  L ++FLK    K  K     +P  + LL+ +
Sbjct: 309 TFRQDLLYRVNTVEIFLPPLRERQDDIPLLANHFLKVYAKKYRKDFSGFKPAAIQLLQNY 368

Query: 346 QWPGNVRELRNVAELYAIGIVKLAGKERLYNQEEMLS--PLDELV--------DDYEKQV 395
            WPGN+REL++  E     I+   G+E        LS  P  E V        D+ EK V
Sbjct: 369 SWPGNIRELQHAIER---AIIMAEGQELDSRDFFFLSSKPSAEKVKTNGTLNLDEVEKNV 425

Query: 396 IEDALFLFSGRVADAANYLQVPRKKLYLRMKKHGL 430
           I+ A+    G ++ AA  L + R  LY R++K+GL
Sbjct: 426 IQKAIDKNGGNISKAAKELGLTRASLYRRLEKYGL 460