Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 385 a.a., Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  149 bits (377), Expect = 1e-40
 Identities = 101/362 (27%), Positives = 184/362 (50%), Gaps = 27/362 (7%)

Query: 24  VLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGMEL 83
           +L+IDD++ +  +   ++           D  + +  I+     +VL D+ MP++ G+E+
Sbjct: 4   ILIIDDEKVIRSTLKEILEYEDYEIHEAQDGVEGLKKIESQDFDLVLCDIKMPKMDGLEV 63

Query: 84  LKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRSF 143
           L ++   D +   I+I+ HG I  AVEA K GA DF+ KP +  +LL  ++  LE +   
Sbjct: 64  LDKVYQSDKQPQFIMISAHGSIESAVEATKKGAFDFIPKPPDLNRLLLTVRNALEKKDLV 123

Query: 144 IEQKLLLSR-SVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYLIHQL 202
            E K+L  + S K ++VG+SA + Q++  + + A  +  V+I G +G G+  +A+ +HQ 
Sbjct: 124 TETKVLKKKLSKKLDMVGESAAILQVKETIEKVAPTDARVLITGPNGTGKELVAHWLHQK 183

Query: 203 TTNN-------------GHLPWVELVASAKTEWSTV----EPKVQESAGGTLLIDHIELL 245
           +  N               L   EL    K  +++     + K +++ GGT+ +D I  +
Sbjct: 184 SGRNKSPFIAVNCAAIPAELIESELFGHEKGAFTSANKQRQGKFEQANGGTIFLDEIGDM 243

Query: 246 SEEVQRNVVQSLLNQERLNRP--------RTRVIAVIDQPPEQLIAQNQLLPELYYLLNQ 297
           S   Q  V+++ L + +++R           RV+A  ++  ++ I +N    +LY+ L+ 
Sbjct: 244 SLSAQAKVLRA-LQEHKISRVGGDKDIKIDVRVLAATNKDLKKEIEENNFREDLYHRLSV 302

Query: 298 GQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGNVRELRNV 357
             I VP L+ R +DI  L   FL+    + G    +++   +A L+ + W GN+RELRNV
Sbjct: 303 ILIQVPALKDRKEDIPLLVDRFLEDIAKEYGTTKKDIDDKAIAKLQEYPWTGNIRELRNV 362

Query: 358 AE 359
            E
Sbjct: 363 VE 364