Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 456 a.a., C4-dicarboxylate transport transcriptional regulatory protein DctD from Azospirillum sp. SherDot2

 Score =  207 bits (526), Expect = 7e-58
 Identities = 139/445 (31%), Positives = 226/445 (50%), Gaps = 38/445 (8%)

Query: 23  TVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGME 82
           +V+ +DD++ V  +    + +AG    A     +A+ HI  +W G ++ D+ MPQ+ G+ 
Sbjct: 16  SVIFVDDERAVRLAGQQALELAGFEVTACDGAERALRHIGRNWPGCLVTDVRMPQMDGLA 75

Query: 83  LLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRS 142
           LL +++ +D  +PVI+ITGHGD+PMAVEA++ GA DFLEKP    +L  + ++ +E RR 
Sbjct: 76  LLARVQEIDPDLPVILITGHGDVPMAVEAMRNGAYDFLEKPFPSDRLTEVARRAVEKRRL 135

Query: 143 FIEQKLLLSR-----SVKRELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAY 197
            +E + L ++          +VG++  +E++R+ +A  A  +  V++ GE+G G+  +A 
Sbjct: 136 VMENRRLRAQIAGGVDPAESIVGRTPGIERLRTTIAAVADTDADVLVFGETGTGKEMVAR 195

Query: 198 LIHQLTTNNGHLPWVELVASAKTEWSTVEP-------------------KVQESAGGTLL 238
            +H  +    + P+V L   A  E S  E                    +++ + GGTL 
Sbjct: 196 ALHAASGRRKN-PFVALNCGAMPE-SIFESELFGHEAGAFTGAAKRRVGRIEHAGGGTLF 253

Query: 239 IDHIE--------LLSEEVQRNVVQSLLNQERLNRPRTRVIAVIDQPPEQLIAQNQLLPE 290
           +D IE         L   +Q  VV+ L + E++     RV+A       Q     +   +
Sbjct: 254 LDEIESMPLALQVKLLRVIQERVVEPLGSNEQV-PVDLRVVAATKSDLRQAADAGKFRAD 312

Query: 291 LYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPGN 350
           LYY LN   + +P LR+R DDI  LF +F+ Q+  +  +         +  L    WPGN
Sbjct: 313 LYYRLNVVVLTIPPLRERRDDIPLLFQHFVAQAAARYNREPRVPSRDQMQRLMGQDWPGN 372

Query: 351 VRELRNVAELYAIGIVKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVADA 410
           VRELRN A+ + +G+  +            LS L E VD YEK +I+  L    G V  A
Sbjct: 373 VRELRNAADRFVLGLEDVVPAP--VTAPSALS-LAEQVDLYEKGLIQAELARHRGSVKAA 429

Query: 411 ANYLQVPRKKLYLRMKKHGLEKDAF 435
              L +PRK  Y ++K++GL +D F
Sbjct: 430 IEALNIPRKTFYDKLKRYGLSRDDF 454