Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 468 a.a., Regulatory protein AtoC from Azospirillum sp. SherDot2

 Score =  138 bits (347), Expect = 4e-37
 Identities = 106/370 (28%), Positives = 181/370 (48%), Gaps = 37/370 (10%)

Query: 23  TVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGME 82
           +VL++DD++ + +     +   G           A  H++     +++LD+ +P   G++
Sbjct: 27  SVLIVDDEEGIRNFLSRSLERRGWRVTTTGSAEDAALHLERHCVDLIILDIALPGQSGLD 86

Query: 83  LLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRS 142
            LK+++A      VI+IT   DI  A+EA++ GA D + KP    Q+++ I + +E  R 
Sbjct: 87  WLKELQAAGFGGDVILITAFADIDTAIEALRAGAADLILKPFRVEQIVSAIARCMERTRL 146

Query: 143 FIEQKLLLSRSVKR-----ELVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAY 197
             E  +L  +  KR     E+VG+SA + ++R+ + + A     V+I GESG G+  +A 
Sbjct: 147 QRENFVLRRQLAKRRGTTDEIVGRSAAILRLRALIERVAPSPSTVLIEGESGVGKELVAR 206

Query: 198 LIHQLTTNNGHLPWVELVASAKTEWSTVEPKV-------------------QESAGGTLL 238
            +H   ++    P+V L  +A +    VE ++                     + GGTL 
Sbjct: 207 ALH-TRSHRAERPFVALNCAAVSA-DLVEAELFGHLRGAFTGAKEARKGLFYYAHGGTLF 264

Query: 239 IDHIELLSEEVQRNVVQSLLNQERLNRP---------RTRVIAVIDQPPEQLIAQNQLLP 289
           +D I  L   +Q  +++ L  +ER  RP           RV+A  ++  +  +A  +   
Sbjct: 265 LDEIGELPLALQSKLLRVL--EERRIRPVGGEQELPVDVRVVAATNRDLKAEVAAGRFRA 322

Query: 290 ELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPG 349
           +L+Y L    + VP LR+R DD+  L   F+     +LG P  +++P   A L AH WPG
Sbjct: 323 DLFYRLAVMTLRVPPLRERGDDVVELARRFMGVLSLRLGVPPLDIDPPLEAALIAHGWPG 382

Query: 350 NVRELRNVAE 359
           NVRELRN+ E
Sbjct: 383 NVRELRNLVE 392