Pairwise Alignments

Query, 439 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 454 a.a., two component response regulator for C4-dicarboxylate transport from Agrobacterium fabrum C58

 Score =  198 bits (504), Expect = 3e-55
 Identities = 128/451 (28%), Positives = 227/451 (50%), Gaps = 38/451 (8%)

Query: 23  TVLLIDDDQDVLDSYLHLMSIAGLTAKAVIDPTQAMSHIQPDWNGVVLLDMYMPQLHGME 82
           T+ L+DDD  +  + +  + + GL   +     QA++ +  D++G+++ D+ MP + G+E
Sbjct: 6   TIFLVDDDSQLRKAMVQTLELDGLPVTSFSRAEQALAALNEDFDGIIITDVRMPGMTGLE 65

Query: 83  LLKQIKAVDDKIPVIVITGHGDIPMAVEAVKMGACDFLEKPINPPQLLTLIKQHLELRRS 142
               ++ +D  +PVI+ITGHGD+PMAV+A+  GA DF+ KP    +++   ++ LE RR 
Sbjct: 66  FFDHVRKIDADLPVILITGHGDVPMAVDALHNGAYDFIAKPFPAERMVESARRALEKRRL 125

Query: 143 FIEQKLLLSRSVKRE----LVGKSAQMEQIRSHVAQYALLNRHVVIVGESGCGRHTIAYL 198
            +E + L   + + E    L+G++  ME++R+ +   A  +  V++ GE+G G+  +A  
Sbjct: 126 VLENRALRRAAGQAEDDLPLIGQTPAMERLRTTLRHIADTDVDVLVAGETGSGKEVVATA 185

Query: 199 IHQLTTNNGHLPWVELVASA------KTEWSTVEP------------KVQESAGGTLLID 240
           +H+ +       +V L   A      ++E    EP            +++ S+GGTL +D
Sbjct: 186 LHRWSKKRSKGNFVALNCGALPETVIESELFGHEPGAFTGAQKKRVGRIEHSSGGTLFLD 245

Query: 241 HIELLSEEVQRNVVQSL---------LNQERLNRPRTRVIAVID--QPPEQLIAQNQLLP 289
            IE +   VQ  +++ L          N+ER    R    A +D   P E    +     
Sbjct: 246 EIESMPLAVQVKMLRVLEMREVSPLGSNEERPVDIRVVAAAKVDLGDPAE----RGTFRE 301

Query: 290 ELYYLLNQGQIDVPLLRQRPDDIAALFHYFLKQSCYKLGKPMPNVEPHYLALLRAHQWPG 349
           +LYY LN   + +P LR+R  DI  LF +F+ ++  +   P+P +       L+ H WPG
Sbjct: 302 DLYYRLNVVTLSIPPLRERKADIPLLFSHFVTKAANRFNMPVPQISAGTSRRLQDHDWPG 361

Query: 350 NVRELRNVAELYAIGI-VKLAGKERLYNQEEMLSPLDELVDDYEKQVIEDALFLFSGRVA 408
           NVREL + AE   +G+  + A      +       L E +D+ E  +I + L   +G VA
Sbjct: 362 NVRELGHFAERVVLGLEAEPAAAPTSQSAIPASGTLPERMDEIEAHIIRETLERSNGDVA 421

Query: 409 DAANYLQVPRKKLYLRMKKHGLEKDAFKARG 439
           +    L + RK  Y ++++HG+ +  +   G
Sbjct: 422 ETIATLGIARKTFYDKLQRHGINRADYVKNG 452