Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1256 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score =  144 bits (364), Expect = 2e-38
 Identities = 102/351 (29%), Positives = 169/351 (48%), Gaps = 32/351 (9%)

Query: 302 LVLRINKAEIDKTYANARW---ALMSQAVTVLSLLSIIAAGFAAWNIN-HLKNSLDSKLA 357
           L L I     D +Y + RW   A    A T+   + ++A   ++     HL+  L + + 
Sbjct: 635 LELDIRLRRPDGSYHDFRWNGLAARDAAGTISRAVGLLADITSSKQTERHLR--LAAAVF 692

Query: 358 RAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWK 417
             + DG+   V+T+ ++ +  VN  F+R++GY  E++ G+   +  SG H  EFY  +W 
Sbjct: 693 ANSHDGL---VVTNLKSEVSAVNPAFSRITGYAEEEILGQNMRLLHSGRHDREFYRSLWS 749

Query: 418 ALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRE 477
            L   G+W+GE+ N+RK+GE   + L I ++ D+    Q +V +F DI+  K  E  L  
Sbjct: 750 ELTTAGIWQGEIWNRRKNGEIFLQQLNISTVYDDSGAAQNFVGAFQDITQAKHSEFELDR 809

Query: 478 LSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDL 537
           ++  D LTDL NR      + L  ++       ++  +  +D+D FK +ND  GH  GD 
Sbjct: 810 IAHYDPLTDLPNRTLLASLLDLAVSR-----PGSRCAVLFVDLDRFKTVNDSLGHMAGDA 864

Query: 538 VLRTVAKGIQDQLRESDFIARIGGEEFAIIFP-YTSIEEAEQVLNRVRLHIASLHHQQVT 596
           VL+  A+ IQD+L     + R GG+EF II    +  E+A  + N    H+     +  +
Sbjct: 865 VLQMAAQRIQDELEAGATLGRHGGDEFVIILEGISGPEDAATLAN----HVIQQMGRPFS 920

Query: 597 LSGG-------------VTDVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
           + GG               +   +P    + AD AL E+K+ GR   +  T
Sbjct: 921 MPGGGEIYLGASVGISLFPEDADTPASLLQHADSALAEAKSHGRGGYAFYT 971



 Score = 31.6 bits (70), Expect = 2e-04
 Identities = 47/204 (23%), Positives = 80/204 (39%), Gaps = 31/204 (15%)

Query: 302 LVLRINKAEIDKTYANARW-ALMSQAVTVLSLLSIIAAGFAAWNINHLKNSLDSKLA--- 357
           LVL++++ EI      AR  A  S A+    LL  +A G      + ++++     A   
Sbjct: 372 LVLKVDRDEI---LGGARTSAFFSAALACALLLLAVAVGRGLLQKSRMRDAARELSAARA 428

Query: 358 --------RAAMD-GMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQ------PSIF 402
                   RAA D   + ++  D    I++ N++  R+ G     + G++      P   
Sbjct: 429 VSEAEARFRAAFDQAATGILHLDLDGTILRANDKACRMLGRPASALTGERLWQLRSPDHA 488

Query: 403 ASGLHKVEFYMQMWKALQDNGVWEGEVINK--RKDGESITEILRIQSIRDEDNVIQFYVA 460
           A+G   +       + L D  + E E        DG ++        +R+ D      + 
Sbjct: 489 AAGADVI-------RPLLDGRIAEIETEESLVHPDGSAVWLAFTFSLVRNADGAADHLLL 541

Query: 461 SFVDISHRKALENRLRELSEKDAL 484
              DIS R+A E  LRE  E+  L
Sbjct: 542 VAQDISARRAAEAALRESEERFGL 565