Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 957 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  122 bits (305), Expect = 1e-31
 Identities = 87/292 (29%), Positives = 149/292 (51%), Gaps = 14/292 (4%)

Query: 352 LDSKLARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEF 411
           L S +  AA +G   +VI D   ++I VN  F+R++G+  +D+ G+      S       
Sbjct: 404 LASTVFEAASEG---IVILDPDYKLIAVNQAFSRVTGFETDDMIGRNVVELPSSRDARRH 460

Query: 412 YMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKAL 471
           +  + +AL  +G W+GE++  RK+GE   + L++  +RD    +   V  F D+S R+  
Sbjct: 461 FPVIRQALLSHGTWQGELVETRKNGELYPQWLQLNVVRDVRGKVSHIVGFFADLSARRES 520

Query: 472 ENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFG 531
           E R+R L+  D LT L NR  F +   L  A +R         L  I++D FK +ND  G
Sbjct: 521 EERMRYLTHYDELTGLANRSLFRE--RLREAHQRVRQGGRNLALLHINLDRFKLLNDSLG 578

Query: 532 HNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIF-PYTSIEE----AEQVLNRVRLH 586
           H   D +L+ +A+ + + L E+D IAR+ G+EFA++F  Y ++      A ++L ++R+ 
Sbjct: 579 HEVADQLLQKMARRLINALPEADTIARLSGDEFAVLFDAYGNLSSLARVATRLLAKLRVP 638

Query: 587 IASLHHQ-QVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
           +    H+  V+ S GV+   D          ++++A+  +K  G N     T
Sbjct: 639 VTVEGHELVVSASMGVSLLPDNAREISALVSQSNMAMQHAKHLGGNNFQFYT 690