Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., histidine kinase from Pseudomonas simiae WCS417

 Score =  139 bits (349), Expect = 2e-37
 Identities = 88/282 (31%), Positives = 147/282 (52%), Gaps = 11/282 (3%)

Query: 356 LARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQM 415
           L RA     + V+IT+R   I+ +N  F  +SGY+ +++ GK P + +SG     FY  +
Sbjct: 9   LVRALDAATNPVLITERSGSIVWLNKAFCLMSGYSKQELVGKTPHLLSSGRQSTTFYRNL 68

Query: 416 WKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRL 475
           W  +     W+GE++ +RKDG + T    I  + D+D V+  ++A   + S        +
Sbjct: 69  WMTIMAGLSWQGEMVERRKDGGTCTVNQIITPVLDQDGVVTHFIAILHNFSLIDEERAAM 128

Query: 476 RELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEG 535
           ++L+  DALT L NR  F   ++       +Y  +    L  ID+DHFK IND  GH  G
Sbjct: 129 QQLAFHDALTGLPNRLLFLNLLNQAINGAIKY--KQPLALMFIDLDHFKSINDTLGHACG 186

Query: 536 DLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFP-YTSIEEAEQVLNRV--RLH---IAS 589
           D +L  VA+ +   +R SD +AR+ G+EFAI+      I++ E + N++   +H   +  
Sbjct: 187 DRLLVAVAERLGQSVRRSDVVARLSGDEFAILISGVDQIDQLEPLANKLVAAIHQPFMVD 246

Query: 590 LHHQQVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRN 628
            H  +  +S G++      +S D    +AD A+Y++K +G N
Sbjct: 247 NHRIETAISIGISLFHGDGSSVDDLLAQADSAMYQAKRNGGN 288