Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 637 a.a., diguanylate cyclase from Pseudomonas simiae WCS417

 Score =  160 bits (406), Expect = 1e-43
 Identities = 98/277 (35%), Positives = 151/277 (54%), Gaps = 11/277 (3%)

Query: 367 VVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWE 426
           V++TD +  I+ VN  F  ++GY+ EDV G+QPS+F SG H   FY QM+++L+  G W 
Sbjct: 97  VLVTDTKGLIVHVNRAFMEITGYSREDVMGRQPSLFKSGRHSSNFYQQMFQSLERTGEWS 156

Query: 427 GEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTD 486
           GE+ N+RK GE   +   I+ I D+   +  YVA F DIS  K  E+ L  L+  D LTD
Sbjct: 157 GEIWNRRKSGEIYPQWQTIRVIHDDQGQVSHYVAVFSDISAIKDSEHELAHLAHHDPLTD 216

Query: 487 LWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGI 546
           L NR  F  T   E A       +    L ++D+DHFK IND  GHN GD +L+ V + +
Sbjct: 217 LPNRLLF--TDRAEQALASAQTHKRGCALLLLDLDHFKIINDSLGHNVGDQLLKLVGERL 274

Query: 547 QDQLRESDFIARIGGEEFAIIF-PYTSIEEAEQVLNRV-----RLHIASLHHQQVTLSGG 600
           +        +AR+GG+EFA++      + +A  +  R+     +  I   H   ++ S G
Sbjct: 275 KALFGPGVTLARLGGDEFAVLAESCPQVAQAAGLAQRMLDAMKQPFIFDGHQLFISASIG 334

Query: 601 VT---DVCTSPDQSYKRADLALYESKTSGRNQISVLT 634
           ++       S +Q  + AD AL+++K++GR   ++ T
Sbjct: 335 ISLFPSDALSAEQLLRNADSALFKAKSAGREGYALYT 371