Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 1059 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

 Score =  149 bits (376), Expect = 6e-40
 Identities = 102/338 (30%), Positives = 167/338 (49%), Gaps = 32/338 (9%)

Query: 316 ANARWALMSQAVTVLSLLSIIAAGFAAWNINHLKNS-----LDSKLARAAMDGMSAVVIT 370
           A   WA++S    V      +   F    INHLK       L +K+  A+ +G   ++I 
Sbjct: 464 AEPSWAVLSARRLVYQGQDALLTAFTP--INHLKLMEQRLMLWAKVFEASSEG---ILII 518

Query: 371 DRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFAS--GLHKVEFYMQMWKALQDNGVWEGE 428
           + ++RI+  N    RL+G+   D+ G+ P    S   LH    +  +W  L   G W+GE
Sbjct: 519 NGEHRILTANRALCRLTGHDLGDLVGEPPEQLMSDGSLH----FADLWPVLDQRGTWQGE 574

Query: 429 VINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTDLW 488
           V  +R++G+S    L    +RD    I  Y+ + +D+S RK  E R+R L+  D LT+L 
Sbjct: 575 VTVRRRNGDSYPAWLVASVVRDGPERISHYIFTSIDVSDRKRSEARIRFLAHHDVLTELP 634

Query: 489 NRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQD 548
           NR    + + L   + +R   +    +  ID+D FK IND  GH+ GD +LR+VA  +  
Sbjct: 635 NRSLCIERLGLALQQAQRKGQRVG--VLFIDLDRFKNINDSLGHHVGDALLRSVAARMSQ 692

Query: 549 QLRESDFIARIGGEEFAIIFPYTSIEEAEQVLNRVRLHIASLHHQQVTLSGGVTDVCTS- 607
            +R  D ++R+GG+EF ++    ++ + +++L+ V   + SL  Q   + G    V  S 
Sbjct: 693 AVRPGDTVSRLGGDEFVVVL--NNVADGQEILSLVERRLISLIRQPHDIDGAEIHVSCSV 750

Query: 608 -----PDQS------YKRADLALYESKTSGRNQISVLT 634
                PD +       + AD+A+Y+SK SGR+     T
Sbjct: 751 GIAVYPDDAQDIDALMRHADVAMYQSKASGRDTARFFT 788