Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  127 bits (318), Expect = 2e-33
 Identities = 89/282 (31%), Positives = 140/282 (49%), Gaps = 12/282 (4%)

Query: 358 RAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWK 417
           RAA+D  +    TD +  I  VN +F  +SGY+ E++ G    I  SGLH+  F++ MW+
Sbjct: 6   RAAVDAAAIFSETDLRGNITYVNQQFCSISGYSREELLGANHRILNSGLHEPTFFVGMWR 65

Query: 418 ALQDNGVWEGEVINKRKDGESI-TEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLR 476
           AL    VW+GE+ N+ KDG     +   +  +      ++ YV+   D++ ++ L + L+
Sbjct: 66  ALVAGRVWKGEICNRSKDGSLYWVDSTMVPLVDPLTGQVRKYVSIRFDVTEKRQLLHTLQ 125

Query: 477 ELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGD 536
                D LT L NR      ++   A  R        C+  +D+D FK +ND +GH  GD
Sbjct: 126 WRVGHDVLTGLPNRAYLSDLLNQALAYSRCEGISLAVCM--LDLDGFKAVNDGYGHAVGD 183

Query: 537 LVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIE-EAEQVLNRVRLHIAS-----L 590
           L+L  VA+ ++  LR  D +AR+ G+EF +I      E +    L RV   +A+      
Sbjct: 184 LLLVEVAQRLKSILRGGDAVARLSGDEFVLILRDVDDEHQLHAALQRVLRALAAPCVVRE 243

Query: 591 HHQQVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRNQ 629
           H   ++ S GVT         D   + AD A+Y +K  GRN+
Sbjct: 244 HTLSLSASIGVTLYPQDDEDADTLVRHADQAMYVAKQRGRNR 285