Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 896 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  134 bits (338), Expect = 1e-35
 Identities = 85/310 (27%), Positives = 155/310 (50%), Gaps = 15/310 (4%)

Query: 336 IAAGFAAWNINHLKNSLDSKL---ARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFE 392
           +A  FA    NH + +  S L    RA     SA ++ +R  R+  VN  FT ++ Y+ +
Sbjct: 322 LADQFAQVITNHKRRAAASALHLFQRAVEQSASAFLLVNRDGRVEYVNPSFTAITQYSTD 381

Query: 393 DVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDED 452
           +V+G+Q     +  +  E       +L     W+GE  ++RK+ E     L I  +  ++
Sbjct: 382 EVQGRQLGELPALENLSELLFDSPSSLAMGNSWQGEFKSRRKNLEPYWGQLSISKVYGDN 441

Query: 453 NVIQFYVASFVDISHRKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQ 512
             +  Y+  + D++  K  + R+  L+  D LT+L NR  F +++    A+      ++ 
Sbjct: 442 RELTHYIGIYEDVTQTKLAQQRIERLAYTDNLTNLGNRPAFIRSLDERFAR----DGESS 497

Query: 513 SCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTS 572
            CL ++DID+FKRIND  GH  GD +L ++A+ +++ L     +AR    EFA++   TS
Sbjct: 498 MCLLLVDIDNFKRINDSLGHQTGDKLLISLARRLRNSLHSGGILARFASNEFAVLLDDTS 557

Query: 573 IEEAEQVLNRVRLHIAS---LHHQQVTLSGGVTDVC-----TSPDQSYKRADLALYESKT 624
           +E+ + V  ++   +     + +Q + ++  V   C       P    K A LAL+++K 
Sbjct: 558 LEDGQGVAQQLLCTLDKPMFVDNQLINVTASVGLACAPLHGVDPASLMKNAGLALHKAKA 617

Query: 625 SGRNQISVLT 634
           +G++Q+ V T
Sbjct: 618 NGKHQVQVFT 627