Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 631 a.a., Sensory box protein from Pseudomonas putida KT2440

 Score =  155 bits (392), Expect = 5e-42
 Identities = 113/364 (31%), Positives = 180/364 (49%), Gaps = 38/364 (10%)

Query: 282 WFSYIKVDLSSVLPDFKPLVLVLRINKAEIDKTYANARWALMSQAVTVLS---LLSIIAA 338
           W +  +V L S+  D   L +  +IN            W L+S  +  +S   LL+ I  
Sbjct: 22  WLALAEVMLHSMTDDPLALTVGRQINVVV---------WVLLSALLIYVSRVRLLNFIGH 72

Query: 339 GFAAWNINHLKNSLDSKLARAAMDG-MSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGK 397
           G         ++    ++A A  D  +  V++TDRQ  I+ VN  F R++GY  ++V G+
Sbjct: 73  GARL----RCEDRERLRMAAAVFDSTLEGVLVTDRQGLIVHVNRAFMRITGYQQDEVIGQ 128

Query: 398 QPSIFASGLHKVEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQF 457
           +PS F SG H + FY +++  L + G W GE+ N+RK GE   +   I +IRD++  +  
Sbjct: 129 RPSKFKSGHHGLAFYQEVFATLAEKGEWSGEIWNRRKSGEIYPQWQTICAIRDDEGELSH 188

Query: 458 YVASFVDISHRKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAI 517
           YVA F DIS  K  E  L  L+  D LT L NR  F  T  LE A      ++    L +
Sbjct: 189 YVAVFSDISAIKHSEQELAYLAHHDPLTGLPNRLLF--TDRLEQALAAAQANKRGCALLL 246

Query: 518 IDIDHFKRINDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFPYTSIEEAE 577
           +D+DHF+ IND  GH  GD +L+ V + + + L     +AR+GG+EF ++     +E  +
Sbjct: 247 LDLDHFQSINDGLGHTIGDQLLKLVGERLGEVLGNGVTLARLGGDEFGVL-----VENCQ 301

Query: 578 QVLNRVRLHIASLHHQQ-----------VTLSGGVT---DVCTSPDQSYKRADLALYESK 623
           QV    +L    +   +           ++ S G++         +Q  + AD ALY++K
Sbjct: 302 QVGQAGKLAQCIIERMREPFQFDGNRLFISASVGISLYPSDALGAEQLLRNADSALYKAK 361

Query: 624 TSGR 627
           ++GR
Sbjct: 362 SNGR 365