Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 994 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  119 bits (299), Expect = 5e-31
 Identities = 85/274 (31%), Positives = 140/274 (51%), Gaps = 16/274 (5%)

Query: 371 DRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGLHKVEFYMQMWKALQDNGVWEGEVI 430
           D++ RI+ VN+ F + +GY+  +V G+ P +       +    ++ + LQ       E++
Sbjct: 448 DQEPRIVFVNDAFEQHTGYSRAEVLGQTPRMLLELDPAIPKLRELAQGLQQTRQARTELM 507

Query: 431 NKRKDGESITEILRIQSIRDEDNVIQFYVASFVDISHRKALENRLRELSEKDALTDLWNR 490
            +RK+G      L + S++     +  +VA   DI+ RK  E+ +R L+  DALTDL NR
Sbjct: 508 VRRKNGAMFWVELEVVSVQATAEEVTHWVAVGRDITQRKTAEDMIRHLAFYDALTDLPNR 567

Query: 491 RKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRINDKFGHNEGDLVLRTVAKGIQDQL 550
           +     +    A   R        L  ID+D+FK +ND  GH+ GD +L+ VA  +   +
Sbjct: 568 QLLLDRLQQALAASAR--SGQHGALMFIDLDNFKILNDTLGHHMGDQLLQKVAARLTRSV 625

Query: 551 RESDFIARIGGEEFAIIFPYTSIEE----------AEQVLNRVRLHIASLHHQQ-VTLSG 599
           R++D +AR+GG+EF ++    S +           AE+VLN +R       HQ   T S 
Sbjct: 626 RKTDMVARLGGDEFVVMVDDLSTDPDAAAFKATALAEKVLNTLREPFQLTGHQHFATPSI 685

Query: 600 GVTDV---CTSPDQSYKRADLALYESKTSGRNQI 630
           GVT      +   +  K+ADLA+Y++K+ GRN +
Sbjct: 686 GVTSFNGQQSDVGELLKQADLAMYQAKSLGRNTL 719