Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 802 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Magnetospirillum magneticum AMB-1

 Score =  148 bits (373), Expect = 1e-39
 Identities = 98/298 (32%), Positives = 146/298 (48%), Gaps = 23/298 (7%)

Query: 346 NHLKNSLDSKLARAAMDGMSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASG 405
           +H +     KL  A      +V+ITD    I  VN  F  +SGY+ ++V G+ P +  SG
Sbjct: 240 SHQRRQQLRKLETALEQAPVSVMITDSHGAIEYVNRAFVLVSGYSEDEVLGRNPRLLKSG 299

Query: 406 LHKVEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDI 465
                 Y  MW  L     W+GE+ N+ KDG    E   I  IRD+D V+  ++A   +I
Sbjct: 300 ETVASLYRDMWHCLASGATWQGELCNRAKDGSLFWEYATISPIRDDDGVVTHFMAVKENI 359

Query: 466 SHRKALENRLRELSEKDALTDLWNRRKFDQTI--SLECAKRRRYPDQAQSCLAIIDIDHF 523
           + RK  E +L   +  D LT L NR   +  +  ++E AKR    +  +  L  +D+D F
Sbjct: 360 TQRKETEQQLVHQATHDTLTGLPNRLLLEDRVHHAIEVAKR----EGRRIGLMFLDLDRF 415

Query: 524 KRINDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFP-YTSIEEAEQVLNR 582
           K +ND  GH  GD +L+ V+  ++  LR SD +AR+GG+EF ++   + S  E  +V  +
Sbjct: 416 KIVNDSLGHVAGDELLKVVSDRLRHTLRRSDTVARLGGDEFVVVLTHFQSTTELAEVAEK 475

Query: 583 VRLHIASLHHQQVTLSGGVTDVCTS------PDQS------YKRADLALYESKTSGRN 628
               I++   + V LSG    V  S      PD         K AD A+Y +K  GRN
Sbjct: 476 ----ISAALDEPVELSGHKVHVGASIGIAIYPDDGDNFNALMKDADTAMYRAKQKGRN 529