Pairwise Alignments

Query, 642 a.a., GGDEF domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 880 a.a., CBS domain-containing protein from Magnetospirillum magneticum AMB-1

 Score =  178 bits (452), Expect = 8e-49
 Identities = 108/298 (36%), Positives = 158/298 (53%), Gaps = 12/298 (4%)

Query: 348 LKNSLDSKLARAAMDG-MSAVVITDRQNRIIKVNNEFTRLSGYTFEDVKGKQPSIFASGL 406
           L++  D  LAR  ++  +  ++I D   +I  VN  FT ++GYT E++ GK P++  SG 
Sbjct: 310 LRSRKDLNLARKVIEASLDGIMIVDSTQKIEFVNPAFTHMTGYTAEEIIGKNPNVLKSGH 369

Query: 407 HKVEFYMQMWKALQDNGVWEGEVINKRKDGESITEILRIQSIRDEDNVIQFYVASFVDIS 466
           H   FY  M+  L+    W+GE+ N+RK+GE   E L I  IRD+   I  Y A F DI+
Sbjct: 370 HDETFYKHMYTVLEAQDYWQGEIWNRRKNGEIYPEWLTINVIRDDTGDITQYAAIFSDIT 429

Query: 467 HRKALENRLRELSEKDALTDLWNRRKFDQTISLECAKRRRYPDQAQSCLAIIDIDHFKRI 526
            RK  E R++ L+  D LT L NRR F   + +  A   R+  Q    +  +D+D FKRI
Sbjct: 430 ERKKTEERIKNLAYFDVLTALPNRRLFTDRLQIAIANAHRHGQQL--AIMFLDLDLFKRI 487

Query: 527 NDKFGHNEGDLVLRTVAKGIQDQLRESDFIARIGGEEFAIIFP-YTSIEEAEQVLNRVRL 585
           ND  GH  GD VL   A  I   +RE D +AR+GG+EF ++ P    +E+  ++  RV  
Sbjct: 488 NDSLGHGVGDQVLVETAARISHCVREGDTVARLGGDEFTVLLPELDHLEDVAKLAERVIA 547

Query: 586 HI-----ASLHHQQVTLSGGVT---DVCTSPDQSYKRADLALYESKTSGRNQISVLTA 635
           H+        +   VT S G+    +  T+ +   K AD A+Y +K  GRN   + TA
Sbjct: 548 HVKQPFLVDDNELYVTTSIGIAVYPEDGTTVEALIKNADTAMYRAKDLGRNSYQLYTA 605