Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., protein translocase subunit SecD from Rhodanobacter sp000427505 FW510-R12

 Score =  386 bits (991), Expect = e-111
 Identities = 229/619 (36%), Positives = 359/619 (57%), Gaps = 30/619 (4%)

Query: 14  INHYSAWKYVVLVTTIIILTLSAIPTWYGEQPSIQLQS-KDATSVLRNVPELTQL-LNKQ 71
           ++ +  WKY ++   ++   + A+P  +   P++Q+ + +DA  + + V +  Q  L  +
Sbjct: 1   MSDFPRWKYALVALVMLFGIIYALPNAFPPVPAVQVTANRDAPPINQAVQQKVQAALTAK 60

Query: 72  NIQADEITQQGDNTTLVFANETQQSQARNALDALVKEGDTITYSYVSVAPKWLGNLGFSP 131
            I   ++  +GD+    FAN   Q      + A + +G T+ +   S  P+WL  +G   
Sbjct: 61  KIAVTDVFMEGDHLLATFANSDVQKSGLEEIKAALGDGYTVAFKLQSNVPRWLSAIGARA 120

Query: 132 IKLGLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRAERLR--GVVVQAMGNDAFEV 189
           + LGLDL+GGV FL+ VD   A ++Q +S  D ++  LR + +R   V   A G     V
Sbjct: 121 MPLGLDLQGGVHFLMQVDQKDAIEKQENSYADDIRSLLRQKNIRYESVTRNAAGGQGIAV 180

Query: 190 KTEQPQALSHVRKYLQENYRGWEIRQGSDQ-----LQVQPSQQNKSEFQTATIQQNLKIM 244
                   S     +   Y    +  G+       L V        E   + I QNL  +
Sbjct: 181 ILRSADDRSTASDAIANEYVDLLVSSGASTGDRFVLNVAIKPDKLRELSRSAITQNLGTL 240

Query: 245 RDRIEELGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAFYEA-KSPTDARSY 303
           R+RI  LG++E L+Q+QG+  I +EL GVQDP++AK +IGA A+L +      P D R+ 
Sbjct: 241 RNRINALGVSEPLIQQQGDSRIVVELAGVQDPAEAKKLIGAVATLQYRPGIGQPGDTRAV 300

Query: 304 D-----------DLILEDGNGRPVILAKRPVLSGEHIVNARAGVDNM-GMSEVNISLDHA 351
           +           +L    G+ RPV+++K+ +++G  +V+A +G+D   G  +V+++L+ A
Sbjct: 301 EAARTGNIPPDANLYYMRGDNRPVLVSKQIIVTGNQLVDASSGIDQQSGTPKVDVTLNAA 360

Query: 352 GGKIMSDFSGKHIGKPMATVYRE--YKTNA-RGETVR----SEKVISVATIQSQLGSQFR 404
           G K M DF+  ++GKPMA +Y E  Y+T    G+ VR    +E VI+ ATIQS    QF+
Sbjct: 361 GAKKMGDFTNANVGKPMAVLYVEQVYETKVVDGKEVRVPKITETVINDATIQSPFSKQFQ 420

Query: 405 ITGAGSMEEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLTF 464
            TG GS +EA +LALLL+ G+L AP+ IVEE  IGASLG++NI  GF A+ LG+A+ L  
Sbjct: 421 TTGLGSAKEASELALLLKGGALAAPMDIVEESVIGASLGQDNIDKGFKAVMLGLALVLLA 480

Query: 465 MALWYRRLGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFER 524
            A++Y+  G VA++AL  N+  LL +++L+ G  LT+PG+AG+VLT+GMA+D NVLI ER
Sbjct: 481 AAIYYKLFGLVADIALFFNLVVLLAVMSLI-GVTLTMPGVAGIVLTLGMAIDANVLICER 539

Query: 525 IRDKLSEGRNFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLL 584
           IR++L  G +   AI  G++ A+STILDAN+T +I A+ L ++G G I+GF +TL +G+L
Sbjct: 540 IREELRNGSSPHAAIRAGYEKAWSTILDANVTHLIAALALTTMGTGAIKGFGVTLMIGIL 599

Query: 585 TSMFSGVFASRALINLVWG 603
           TS+F+ V  + A    + G
Sbjct: 600 TSLFTSVTLTHAFTAAIHG 618