Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 627 a.a., protein translocase subunit SecD from Variovorax sp. OAS795

 Score =  368 bits (945), Expect = e-106
 Identities = 216/613 (35%), Positives = 359/613 (58%), Gaps = 34/613 (5%)

Query: 14  INHYSAWKYVVLVTTIIILTLSAIPTWYGEQPSIQLQSKDATSVLRNVPE--LTQLLNKQ 71
           +N Y  WKY ++V  +++  + ++P ++GE P++Q+ +  +T  +    +  + + L   
Sbjct: 1   MNRYPVWKYAIIVIVLLVGLIYSLPNFFGEAPAVQVSAAKSTVKVDAATQSRVEEALKTA 60

Query: 72  NIQADEITQQGDNTTLVFANETQQSQARNALD-ALVKEGDTITY----SYVSVAPKWLGN 126
            +  D  T +G +    FA+  +Q +AR+A+  ALV +    +Y    + VS +P WL  
Sbjct: 61  GVTPDLFTLEGGSLRARFASTDEQLKARDAVQRALVPDPADPSYVVALNLVSRSPSWLTA 120

Query: 127 LGFSPIKLGLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRAERLRGVVVQAMGNDA 186
           L   P+ LGLDLRGGV FLL VD+  A  ++ +S    ++ + R + +RG  V   G  A
Sbjct: 121 LHAFPMYLGLDLRGGVDFLLQVDMKGAIDKKAESFAGDLRTTFRDKGIRGTSVNRNGQ-A 179

Query: 187 FEVKTEQPQALSHVRKYLQENYRGWEIRQGSD----QLQVQPSQQNKSEFQTATIQQNLK 242
            EV      AL   ++ +Q+ +         +    +L      +     Q A ++QN+ 
Sbjct: 180 IEVSFRDAAALQSAKQLIQDQFPDLSTTDSQEGNLWRLTATIKPEAARRLQDAALKQNIT 239

Query: 243 IMRDRIEELGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAFYEAKSPTDARS 302
            + +RI ELG+ E ++Q+QG   I ++LPGVQD ++AK+++G TA+L         + R+
Sbjct: 240 TLHNRINELGVAEPVIQQQGLDRIVVQLPGVQDTAKAKDILGRTATLEMRLVDESPEGRA 299

Query: 303 YD----------DLILEDGNGRPVILAKRPVLSGEHIVNARAGVDNMG-MSEVNISLDHA 351
            +          +  LE  NGRPVI+ K+ +++GE++ +A+ G D      +V++++D  
Sbjct: 300 AELSGGPVPFGSEKFLER-NGRPVIVKKQVLVTGENLTDAQPGFDQQSNQPKVDLTMDAK 358

Query: 352 GGKIMSDFSGKHIGKPMATVYREYKTNARGETVRSEKVISVATIQSQLGSQFRITGAGSM 411
           GG+IM D S ++  K MA +  E     +GE      V++  +I  +LG++F+I+G+ ++
Sbjct: 359 GGRIMRDVSRENFKKRMAMLIFE---KGKGE------VLTAPSINGELGNRFQISGSMNV 409

Query: 412 EEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLTFMALWYRR 471
            EA  LALLLRAGSL AP+ I++ERTIG SLG +NI  GF ++  G    + FM  +Y  
Sbjct: 410 AEAADLALLLRAGSLAAPMEIIQERTIGPSLGADNIEKGFKSVMYGFLAIMVFMCAYYAL 469

Query: 472 LGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIRDKLSE 531
            G  +++AL VN+  L+ ++++L  A LTLPGIA + L +G+A+D+NVLI ER+R++L  
Sbjct: 470 FGLFSSIALAVNLMLLVAILSMLQ-ATLTLPGIAAMALAIGVAIDSNVLINERVREELRN 528

Query: 532 GRNFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLLTSMFSGV 591
           G +   AI  G+D A+ TILD+N+TT+I  + L + G+GPI+GFA+   +G++TSMFS V
Sbjct: 529 GASPQAAIHAGYDRAWGTILDSNVTTLIAGIALLAFGSGPIRGFAVVHCIGIVTSMFSAV 588

Query: 592 FASRALINLVWGR 604
           F SR L+N  +G+
Sbjct: 589 FFSRGLVNFWYGQ 601