Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 317 a.a., Protein-export membrane protein SecF (TC 3.A.5.1.1) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score = 62.4 bits (150), Expect = 3e-14
 Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 4/193 (2%)

Query: 408 AGSMEEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLTFMAL 467
           AG     Q   +L    +    V +     +G  +G+E + NG  AL L +   + ++AL
Sbjct: 95  AGQSSGQQSETVLAALKAQNPAVELRRTEFVGPQVGQELVTNGLMALGLVIVGIMIYLAL 154

Query: 468 WYR-RLGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFERIR 526
            +  +    A VA L ++  +LG  A       +L  +A ++  +G +V+ +V+IF+RIR
Sbjct: 155 RFEWKYAVSAIVANLHDVVIILGFFAFFQWE-FSLAVLAAVLAVLGYSVNESVVIFDRIR 213

Query: 527 DKLSEGR--NFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLGLL 584
           +     R  N  Q ID    S  S  +  + +T    + +   G   +  F+L L +G+ 
Sbjct: 214 ETFRRQRKMNTHQVIDHAITSTISRTIITHGSTQAMVLSMLVFGGPTLFYFSLALTIGIC 273

Query: 585 TSMFSGVFASRAL 597
             ++S VF   A+
Sbjct: 274 FGIYSSVFVGAAM 286