Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 322 a.a., protein translocase subunit SecF from Erwinia amylovora T8

 Score = 57.8 bits (138), Expect = 7e-13
 Identities = 47/196 (23%), Positives = 94/196 (47%), Gaps = 12/196 (6%)

Query: 408 AGSMEEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLTFMAL 467
           AG    ++ L ++  A    A V  +E   +G S+G +    G  AL   +   L ++  
Sbjct: 105 AGEALGSKVLGIVNEATGQNATVKRIE--FVGPSVGSDLAQAGGMALLSALIAILFYIGF 162

Query: 468 ---WYRRLGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIFER 524
              W   LG V  +AL  ++   +GL++L     + L  +A L+  +G +++  +++ +R
Sbjct: 163 RFEWRLALGTV--LALAHDVVITMGLLSLFQ-IEIDLTIVASLMSVIGYSLNDKIVVSDR 219

Query: 525 IRD---KLSEGRNFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGL 581
           IR+   K+  G ++    +       S  +  ++TT+   +IL+  G   ++GF+LT+ +
Sbjct: 220 IRENFRKIRRGSSY-DITNVSLTQTLSRTIITSVTTLAMVLILFIFGGALLKGFSLTMLI 278

Query: 582 GLLTSMFSGVFASRAL 597
           G+     S ++ S AL
Sbjct: 279 GITIGTISSIYVSSAL 294