Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., protein translocase subunit SecD from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  250 bits (639), Expect = 9e-71
 Identities = 169/496 (34%), Positives = 268/496 (54%), Gaps = 44/496 (8%)

Query: 128 GFSP---IKLGLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRA--------ERLRG 176
           GF P   + LGLDL+GG   LL VDV    +++  ++++ V+ +L          +R  G
Sbjct: 38  GFMPKNKLNLGLDLQGGSYLLLEVDVPAMREKRVTNLIEDVRVTLNGAGVATNGFQREAG 97

Query: 177 VVVQAMGNDAFEVKTEQPQALSHVRKYLQENYRGWEI-----RQGSDQLQVQPSQQNKSE 231
            VV  + N A     +   A   +++   +   G +      R G ++++   +    + 
Sbjct: 98  GVVVTLANPA-----QGDAAFKALQQLGGQVGPGGQAERTATRLGDNRIRFAYTDAALNG 152

Query: 232 FQTATIQQNLKIMRDRIEELGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAF 291
                + Q+++++R RI+ LG  E  + RQG   I ++ PG  DPS+ + VIG TA L F
Sbjct: 153 MGATAVDQSIEVVRRRIDSLGTREPSITRQGADRIVVQAPGESDPSKLEEVIGQTAQLTF 212

Query: 292 YEA---KSPTDARSY----DDLILEDGNGRPVILAKRPVLSGEHIVNARAGVDNMGMSEV 344
                  S  DA +     D  +L+  +G P ++ KR ++SGE++  A  G D  G   +
Sbjct: 213 QMVDVENSVQDALAGRVPPDSELLQGEDGTPYLVKKRVLVSGENLTRAGVGSDQSGRPAI 272

Query: 345 NISLDHAGGKIMSDFSGKHIGKPMATVYREYKTNARGETVRSEKVISVATIQSQLGS-QF 403
           +   D AG +   + +  ++ KP A +                KVIS  TIQS + S   
Sbjct: 273 DFRFDGAGARRFGEATAANLQKPFAIIL-------------DGKVISAPTIQSAITSGSG 319

Query: 404 RITGAGSMEEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAALALGMAMTLT 463
           +ITG  S++EA  L  LL  G+L AP+ + E RT+ A LG + +A G  + A+G A+ + 
Sbjct: 320 QITGNFSIQEAATLVNLLNGGALPAPLNVEERRTVTAELGADAVAAGALSTAVGFAIIVL 379

Query: 464 FMALWYRRL-GWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMAVDTNVLIF 522
           FM L Y  L G V+ V L++N   ++  ++L   A LTLPGIAGL+LT  +AVD NVLI+
Sbjct: 380 FMILAYGLLFGGVSVVGLVLNGVLIVAAMSLTQ-ATLTLPGIAGLILTFAVAVDANVLIY 438

Query: 523 ERIRDKLSEGRNFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQGFALTLGLG 582
           ER+RD+   GR+   ++D GF+ A  TI+DAN+TT++ A I++  G GP++GFA TL +G
Sbjct: 439 ERMRDEARAGRSVIASMDAGFNKAMGTIVDANLTTLVAAGIMFVFGEGPVRGFAWTLTIG 498

Query: 583 LLTSMFSGVFASRALI 598
           + TS+FS V  ++ L+
Sbjct: 499 VFTSVFSSVLVAQVLL 514