Pairwise Alignments

Query, 612 a.a., protein translocase subunit SecD from Vibrio cholerae E7946 ATCC 55056

Subject, 633 a.a., Protein translocase subunit SecD from Acinetobacter radioresistens SK82

 Score =  404 bits (1039), Expect = e-117
 Identities = 242/637 (37%), Positives = 382/637 (59%), Gaps = 52/637 (8%)

Query: 17  YSAWKYVVLVTTIIILTLSAIPTWYGEQPSIQLQ-SKDATSVLRNV-PELTQLLNKQNIQ 74
           Y AWKY++++  ++I TL A+P+ Y ++P++Q+  +K  T + ++V  +  Q+L + NI 
Sbjct: 3   YPAWKYLLILVVLVISTLYALPSLYPDEPAVQISGAKAGTQIDQSVIQKAEQILKEANIP 62

Query: 75  ADEITQQGDNTTLVFANETQQSQARNALDALVKEGDTITYSYVSVAPKWLGNLGFSPIKL 134
           + + T   +   L   +   Q +A++ L   + E   +  +     P+WL  +G  P+KL
Sbjct: 63  SHDNTFTNNAALLRVDSTDAQLKAKDVLRRALGEEYVVALNLAPTTPEWLQKIGAKPMKL 122

Query: 135 GLDLRGGVQFLLNVDVDKAFQEQRDSMMDAVKDSLRAERLRGVVVQAMGNDAFEVKTEQP 194
           GLDLRGGV FLL VD+DKA  ++ ++    ++  LR   L+   +  + N+   ++  Q 
Sbjct: 123 GLDLRGGVHFLLEVDMDKALSQRMETSATDLRRQLRENNLKFNSL-TLNNNQINLQFAQN 181

Query: 195 QALSHVRKYLQENYRGWEIRQGS------DQLQVQPSQQNKSEFQTATIQQNLKIMRDRI 248
                V  +L+ N  G E  Q +        L++  +   + E Q+  + QNL  +R+RI
Sbjct: 182 DDREAVMDFLRRN--GNEFTQQALASSTGPMLRLTYTDARRQEIQSYAVNQNLTTLRNRI 239

Query: 249 EELGITEALVQRQGEHAIRIELPGVQDPSQAKNVIGATASLAF-------------YEAK 295
            ELG+ EALVQ QG + I ++LPGVQD ++AK V+G TA+L F             Y  K
Sbjct: 240 NELGVAEALVQTQGSNRIVVDLPGVQDTAEAKRVLGRTANLEFRLVSDLNDQYIDPYTGK 299

Query: 296 SP-------TDARSYDDLILEDGNGRPVILAKRPVLSGEHIVNARAGVD-NMGMSEVNIS 347
           S        T+  +Y+ L     +GR ++L +  +L+GE + NA +G   + G +EVNI+
Sbjct: 300 SNGQPLPPGTELFAYESL----DSGRQLLLQRNRILTGERVQNASSGFSQDTGGAEVNIT 355

Query: 348 LDHAGGKIMSDFSGKHIGKPMATVYREYK------------TNARGETVRSEKV-ISVAT 394
           LD AGGK+M+D +   +GK MA ++ E K            T     T  +E V I+ AT
Sbjct: 356 LDSAGGKLMADATRNAVGKRMAVLFIENKQRISYVTDPVTGTQTEVRTPYAESVVINAAT 415

Query: 395 IQSQLGSQFRITGAGSMEEAQQLALLLRAGSLTAPVTIVEERTIGASLGEENIANGFAAL 454
           IQ+ LGSQFRITG  S +EA +LAL+LRAG+L AP+  VEER +G SLG+ENI  G  + 
Sbjct: 416 IQAVLGSQFRITGLDSPQEASELALMLRAGALAAPMYFVEERVVGPSLGQENIDKGVLST 475

Query: 455 ALGMAMTLTFMALWYRRLGWVANVALLVNMACLLGLIALLPGAVLTLPGIAGLVLTVGMA 514
            +G  +   +M +++R  G +AN AL+ N+A  L +++ + GA LTLPGIAG+V+T+GMA
Sbjct: 476 QIGFLLVAIWMVVFFRLFGLIANFALVFNLAMTLSIMSWI-GAALTLPGIAGIVITIGMA 534

Query: 515 VDTNVLIFERIRDKLSEGRNFAQAIDTGFDSAFSTILDANITTMITAVILYSIGNGPIQG 574
           VD NVLI ERIR+++  G +  QAI  G+D A++TI D+N+TT + A IL++IG GPI+G
Sbjct: 535 VDANVLICERIREEMKWGASPKQAIVAGYDRAYNTIFDSNLTTFLVAFILFAIGTGPIKG 594

Query: 575 FALTLGLGLLTSMFSGVFASRALINLVWGRDTRRDVR 611
           FA+TL +G+  SMF+ +  +RA++ +++G+  RR+++
Sbjct: 595 FAVTLMIGIACSMFTAITVTRAIVQIIYGK--RRNLK 629