Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., Protein-export membrane protein SecF from Xanthobacter sp. DMC5

 Score =  163 bits (413), Expect = 5e-45
 Identities = 99/306 (32%), Positives = 165/306 (53%), Gaps = 7/306 (2%)

Query: 1   MVDYLKSRIR----PIRYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSV 56
           ++DY+ ++       +R+ T   S  L +++   FAI G N+G+DF GG + EA  +   
Sbjct: 3   LIDYIPAQTNIHFMRLRHWTFPFSAALSIVACLLFAIHGFNLGIDFKGGTLIEAQTSQQQ 62

Query: 57  TK-SQLMDQLQPVLGESVSATPSGEEGRWVIRYPL--AAEDATPVDIATELHHISDQVQI 113
                L + L  +    V     G     +IR       ++A    +A     +     +
Sbjct: 63  ADIGALREHLTDLDVGDVQIQEFGSPRDVLIRIGAFGTTDEAQQAILAKVQGVLGTDYSV 122

Query: 114 VSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFF 173
                VG  V  EL+ Q  LAL++  +++L YL FRFEW+ A GA++  +HD+ + L  +
Sbjct: 123 RRVETVGPSVSGELVRQSILALVLGAVAVLGYLWFRFEWQFAVGAIVTTMHDIFVTLMIY 182

Query: 174 AITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRT 233
           +   ++F+LT  AA+L ++GYSLND++++ DRIRE+L   ++ P  ++ D A+ ATFSRT
Sbjct: 183 SAFGIDFDLTSIAAILTIMGYSLNDTVVVYDRIREMLRRYKKLPLPELLDIAVNATFSRT 242

Query: 234 MVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHYLP 293
           ++ S TT     AL+  GG  L+GF++AM +G++ GT+S+I +   +   LGL +     
Sbjct: 243 IIVSTTTFFATLALYFFGGEVLRGFSLAMTVGVVIGTYSTIFVAAPILIHLGLRASTVSL 302

Query: 294 VELDAA 299
              DAA
Sbjct: 303 PTKDAA 308