Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 622 a.a., preprotein translocase subunit SecD from Pseudomonas simiae WCS417

 Score = 55.1 bits (131), Expect = 4e-12
 Identities = 40/160 (25%), Positives = 84/160 (52%), Gaps = 7/160 (4%)

Query: 119 VGSQVGQELIDQGGLALL--ICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAIT 176
           +G  +G + I +G  A L  +  +S+     +RF   +A+   +AL  +++++L   ++ 
Sbjct: 449 IGPSLGADNITKGVDAALWGMLFVSLFIIAIYRFFGVIAT---VALAGNMVMLLALMSLL 505

Query: 177 QMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVT 236
                L   A ++  +G +++ +++I  RIRE + A      A IN+      F+  + +
Sbjct: 506 GATLTLPGIAGIVLTMGMAVDANVLIFSRIREEIAAGMTVQRA-INE-GFGRAFTAILDS 563

Query: 237 SGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISI 276
           + TTL+    L+ MG  P++GFA+ M +GI +  +++I +
Sbjct: 564 NLTTLLVGGILFAMGTGPVKGFAVTMSLGIFTSMFTAIMV 603