Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., preprotein translocase subunit SecF from Pseudomonas simiae WCS417

 Score =  190 bits (483), Expect = 3e-53
 Identities = 107/284 (37%), Positives = 167/284 (58%), Gaps = 3/284 (1%)

Query: 12  IRYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGE 71
           +R +   ++VLL V++L ++  KGLN GLDFTGG + E         + +  +L      
Sbjct: 10  VRNVAFGVTVLLTVLALFSWFHKGLNYGLDFTGGTLIELTYEKPADVTLVRSELVKAGYH 69

Query: 72  SVSATPSGEEGRWVIRYPLAAEDATPVDIATELHHIS--DQVQIVSNSMVGSQVGQELID 129
                  G     ++R P   +      +A  L  +   +   +     VG QVG+EL D
Sbjct: 70  EAIVQSFGATTDLLVRMP-GEDPQLGHQVAEALQKVGGDNPASVKRVEFVGPQVGEELRD 128

Query: 130 QGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVL 189
           QGGL +L+ L+ I+ YL+FRF+W+   GA+++L+HDVI+ +G  A  Q+ F+LTV AAVL
Sbjct: 129 QGGLGMLMALVGIMIYLAFRFQWKFGVGAIVSLIHDVIVTVGILAYFQITFDLTVLAAVL 188

Query: 190 AVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWL 249
           A++GYSLND+I++ DR+RE     ++    +  + +   T  RTM TS +TL+ I+AL +
Sbjct: 189 AIIGYSLNDTIVVFDRVRENFRVLRKATLIENINISTTQTLLRTMATSISTLLAIAALMI 248

Query: 250 MGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHYLP 293
            GG  L GF++A+FIG+++GT+SSI I  V+  WL L S+  +P
Sbjct: 249 FGGDNLWGFSLALFIGVLAGTYSSIYIANVVLIWLNLNSEDLIP 292