Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 319 a.a., Protein translocase subunit SecF from Variovorax sp. SCN45

 Score =  177 bits (450), Expect = 2e-49
 Identities = 100/276 (36%), Positives = 154/276 (55%), Gaps = 3/276 (1%)

Query: 15  ITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVS 74
           +  I+SV+   +++     +GL++ ++FTGG V E     S    ++ D +  +    V 
Sbjct: 18  VLNIVSVVTFALAVFFLFHRGLHLSVEFTGGTVIEVAYEQSADIGKVRDAVTKLGYPEVQ 77

Query: 75  ATPSGEEGRWVIRYPLA---AEDATPVDIATELHHISDQVQIVSNSMVGSQVGQELIDQG 131
               G      IR P     + D     +   L  +          +VG QVG+EL   G
Sbjct: 78  VQNYGTSRDVQIRLPAQKGMSSDQQSAQVMQALKSVDPSATQRGIEVVGPQVGEELTTNG 137

Query: 132 GLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAV 191
             AL + ++ I+ YL+FRFEW+ A   +LA LHDV+++LGFFA  Q EF+L V AAVLAV
Sbjct: 138 LKALGMVVVGIMIYLAFRFEWKFALATVLANLHDVVIILGFFAFFQWEFSLAVLAAVLAV 197

Query: 192 LGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMG 251
           LGYS+N+S++I DRIRE     ++  T +I D AI +T SRT++T G+T + + +++  G
Sbjct: 198 LGYSVNESVVIFDRIRENFRRYRKMTTTEIIDNAITSTISRTIITHGSTQLVVLSMFFFG 257

Query: 252 GAPLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLE 287
           G  L  FA+A+ IGI  G +SS  +   +  WLG++
Sbjct: 258 GPTLHYFALALTIGICFGIYSSCFVAAAIAMWLGIK 293