Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 302 a.a., Sec translocation complex subunit SecF from Pseudomonas putida KT2440

 Score =  186 bits (473), Expect = 4e-52
 Identities = 107/285 (37%), Positives = 166/285 (58%), Gaps = 5/285 (1%)

Query: 12  IRYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGE 71
           +R +   ++VLL V++L ++  KGLN GLDFTGG + E           +  +L      
Sbjct: 9   VRNVAFAVTVLLTVLALFSWWQKGLNFGLDFTGGTLIELTYERPADVKAVRAELVESGFN 68

Query: 72  SVSATPSGEEGRWVIRYPLAAED---ATPVDIATELHHISDQVQIVSNSMVGSQVGQELI 128
                  G     ++R P   +D      V  A +     +  ++     VG QVG+EL 
Sbjct: 69  EAVVQSFGATTDLLVRMP--GDDPMLGNKVAEALQKAGGDNPAKVKRVEFVGPQVGEELR 126

Query: 129 DQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAV 188
           DQGG+ +L+ L  IL YL+FRF+W+ A GA+++L+HDV++ LG  +  Q+ F+LTV AAV
Sbjct: 127 DQGGIGMLLALGGILIYLAFRFQWKFAVGAIVSLIHDVVVTLGILSFFQITFDLTVLAAV 186

Query: 189 LAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALW 248
           LA++GYSLND+I++ DR+RE     ++    +  + +   T  RT+ TS +TL+ I+AL 
Sbjct: 187 LAIIGYSLNDTIVVFDRVRENFRVMRKASLIENINVSTTQTLLRTVATSVSTLLAIAALL 246

Query: 249 LMGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHYLP 293
             GG  L GF++A+FIG+++GT+SSI I  V+  WL L S+  +P
Sbjct: 247 FFGGDNLFGFSLALFIGVMAGTYSSIYIANVVLIWLNLSSEDLIP 291