Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., Protein-export membrane protein SecD (TC 3.A.5.1.1) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 57.8 bits (138), Expect = 6e-13
 Identities = 44/169 (26%), Positives = 91/169 (53%), Gaps = 5/169 (2%)

Query: 111 VQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVL 170
           +QIV    +G  +G + I QG  A L  L+  + ++ F ++ +    A  AL+ +++L++
Sbjct: 422 IQIVEERTIGPTLGMQNIKQGLEACLAGLVVSILFMIFFYK-KFGLIATSALVANLVLIV 480

Query: 171 GFFAITQ-MEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIAT 229
           G  ++      ++   A ++  L  +++ +++I++RI+E L +  +T    IN+      
Sbjct: 481 GIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEEL-SNGRTVQQAINE-GYAGA 538

Query: 230 FSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIGT 278
           FS     + TTL+ +  L+ +G   ++GFAI   IG+ +  +++I IGT
Sbjct: 539 FSSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAI-IGT 586