Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., protein-export membrane protein, SecD/SecF family from Enterobacter asburiae PDN3

 Score = 58.2 bits (139), Expect = 5e-13
 Identities = 42/169 (24%), Positives = 88/169 (52%), Gaps = 5/169 (2%)

Query: 111 VQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVL 170
           +QIV    +G  +G + I QG  A L  L+  + ++ F ++ +    A  AL+ +++L++
Sbjct: 422 IQIVEERTIGPTLGMQNIQQGLEACLAGLVVSILFMIFFYK-KFGLIATSALIANLVLII 480

Query: 171 GFFAITQ-MEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIAT 229
           G  ++       +   A ++  L  +++ +++I++RI+E L   +    A   D+     
Sbjct: 481 GIMSLLPGATLTMPGIAGIVLTLAVAVDANVLINERIKEELSNGRSIQQAI--DEGYKGA 538

Query: 230 FSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIGT 278
           FS     + TTL+ +  L+ +G   ++GFAI   IG+ +  +++I +GT
Sbjct: 539 FSSIFDANVTTLIKVLILYAVGTGAIKGFAITTGIGVATSMFTAI-VGT 586