Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., protein-export membrane protein, SecD/SecF family from Enterobacter asburiae PDN3

 Score =  198 bits (503), Expect = 2e-55
 Identities = 107/284 (37%), Positives = 169/284 (59%), Gaps = 5/284 (1%)

Query: 19  ISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVSATPS 78
           IS LL+++S+G  ++KG N GLDFTGG V E  +   V   Q+   LQ    E       
Sbjct: 29  ISGLLLILSIGIMSVKGFNWGLDFTGGTVIEISLEKPVDMDQMRLSLQKAGFEEPLLQNF 88

Query: 79  GEEGRWVIRYPLAAEDATPVDIATELHHI-----SDQVQIVSNSMVGSQVGQELIDQGGL 133
           G     ++R P   +     ++ +++  +     S    +     VG  VG +L   G +
Sbjct: 89  GSSRDIMVRMPPVHDANGSQELGSKVVSVINETTSQNAAVKRIEFVGPSVGADLAQTGAM 148

Query: 134 ALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVLG 193
           ALL+ L+SIL Y+ FRFEWRLA+G ++AL HDV++ +G  ++  +E +LT+ A++++V+G
Sbjct: 149 ALLVALISILVYVGFRFEWRLAAGVVIALAHDVVITMGILSLFHIEIDLTIVASLMSVIG 208

Query: 194 YSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGGA 253
           YSLNDSI++SDRIRE     ++    +I + ++  T  RT++TSGTTLM I  L+L GG 
Sbjct: 209 YSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLFLFGGP 268

Query: 254 PLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHYLPVELD 297
            L+GF++ M IG+  GT SSI + + L   LG++ +H L  +++
Sbjct: 269 VLEGFSLTMLIGVTIGTASSIYVASALALKLGMKREHLLQQKVE 312