Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 604 a.a., Protein translocase subunit SecD from Escherichia coli ECRC62

 Score = 58.9 bits (141), Expect = 3e-13
 Identities = 48/170 (28%), Positives = 91/170 (53%), Gaps = 7/170 (4%)

Query: 111 VQIVSNSMVGSQVGQELIDQGGLALLICLL-SILAYLSFRFEWRLASGALLALLHDVILV 169
           +QIV    +G  +G + I+QG  A L  LL SIL  + F  ++ L   A  AL+ ++IL+
Sbjct: 422 IQIVEERTIGPTLGMQNIEQGLEACLAGLLVSILFMIIFYKKFGLI--ATSALIANLILI 479

Query: 170 LGFFAITQ-MEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIA 228
           +G  ++      ++   A ++  L  +++ +++I++RI+E L   +    A   D+    
Sbjct: 480 VGIMSLLPGATLSMPGIAGIVLTLAVAVDANVLINERIKEELSNGRTVQQAI--DEGYRG 537

Query: 229 TFSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIGT 278
            FS     + TTL+ +  L+ +G   ++GFAI   IG+ +  +++I +GT
Sbjct: 538 AFSSIFDANITTLIKVIILYAVGTGAIKGFAITTGIGVATSMFTAI-VGT 586