Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., Protein translocase subunit SecF from Escherichia coli ECRC62

 Score =  189 bits (480), Expect = 7e-53
 Identities = 105/284 (36%), Positives = 165/284 (58%), Gaps = 5/284 (1%)

Query: 19  ISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVSATPS 78
           IS LL++ ++    ++G N GLDFTGG V E  +        + D LQ    E       
Sbjct: 29  ISGLLLIAAIVIMGVRGFNWGLDFTGGTVIEITLEKPAEIDVMRDALQKAGFEEPMLQNF 88

Query: 79  GEEGRWVIRYPLAAEDATPVDIATELHHISDQ-----VQIVSNSMVGSQVGQELIDQGGL 133
           G     ++R P A  +     + +++  + ++       +     VG  VG +L   G +
Sbjct: 89  GSSHDIMVRMPPAEGETGGQVLGSQVLKVINESTNQNAAVKRIEFVGPSVGADLAQTGAM 148

Query: 134 ALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVLAVLG 193
           AL+  LLSIL Y+ FRFEWRLA+G ++AL HDVI+ LG  ++  +E +LT+ A++++V+G
Sbjct: 149 ALMAALLSILVYVGFRFEWRLAAGVVIALAHDVIITLGILSLFHIEIDLTIVASLMSVIG 208

Query: 194 YSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWLMGGA 253
           YSLNDSI++SDRIRE     ++    +I + ++  T  RT++TSGTTLM I  L+L GG 
Sbjct: 209 YSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLMVILMLYLFGGP 268

Query: 254 PLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHYLPVELD 297
            L+GF++ M IG+  GT SSI + + L   LG++ +H L  +++
Sbjct: 269 VLEGFSLTMLIGVSIGTASSIYVASALALKLGMKREHMLQQKVE 312