Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 323 a.a., protein translocase subunit SecF from Dickeya dianthicola ME23

 Score =  187 bits (474), Expect = 4e-52
 Identities = 106/283 (37%), Positives = 169/283 (59%), Gaps = 13/283 (4%)

Query: 19  ISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGESVSATPS 78
           +S LL+++S+    ++G N GLDFTGG V E     S+ K   ++Q++  L ++  A P 
Sbjct: 29  LSGLLLLLSIVVMGVRGFNWGLDFTGGTVIEI----SLEKPADLEQMRGALEKAGFADPL 84

Query: 79  ----GEEGRWVIRYPLAAEDATPVDIATELHHI-----SDQVQIVSNSMVGSQVGQELID 129
               G     ++R P A ++     + +++  +     S    +     VG  VG +L  
Sbjct: 85  VQNFGSSRDIMVRMPPAHDETGGQALGSKVVSVINDATSQHAAVKRIEFVGPSVGADLAQ 144

Query: 130 QGGLALLICLLSILAYLSFRFEWRLASGALLALLHDVILVLGFFAITQMEFNLTVFAAVL 189
            G +AL+  L+ IL Y+ FRFEWRLA+G ++AL HDVI+ +G  ++  +E +LT  A+++
Sbjct: 145 TGAMALMAALICILVYVGFRFEWRLAAGVVIALAHDVIITMGVLSLFSIEIDLTTVASLM 204

Query: 190 AVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQAIIATFSRTMVTSGTTLMTISALWL 249
           +V+GYSLNDSI++SDRIRE     ++    +I + ++  T  RT++TSGTTL+ I  L+L
Sbjct: 205 SVIGYSLNDSIVVSDRIRENFRKIRRGTPYEIFNVSLTQTLHRTLITSGTTLVVILMLYL 264

Query: 250 MGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEWLGLESKHYL 292
            GGA LQGF++ M IG+  GT SSI + + L   LG++ +H L
Sbjct: 265 FGGAMLQGFSLTMLIGVTIGTASSIYVASALALKLGMKREHML 307