Pairwise Alignments

Query, 300 a.a., protein translocase subunit SecF from Vibrio cholerae E7946 ATCC 55056

Subject, 989 a.a., protein-export membrane protein, SecD/SecF family from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  133 bits (334), Expect = 2e-35
 Identities = 91/294 (30%), Positives = 143/294 (48%), Gaps = 30/294 (10%)

Query: 13  RYITGIISVLLMVISLGAFAIKGLNMGLDFTGGMVTEAIINHSVTKSQLMDQLQPVLGES 72
           R +  +IS  +++I L    I GL  G+DFTGG          V  S L   L      S
Sbjct: 676 RKVAYLISTGIIIIGLAFAVINGLKFGVDFTGGRSYIVEFAEPVAASDLKTGLDKAFDGS 735

Query: 73  VSATPSGE---------------------EGRWVIRYPLAAEDATPVDIATELHHISDQ- 110
           V A   G                      E    +R  +A  D T      E+  + D  
Sbjct: 736 VEAKTYGSNNVIKITTSYLINDDSDEANSEVATKVREGIA--DVTGFSFVDEVAQMGDSS 793

Query: 111 VQIVSNSMVGSQVGQELIDQGGLALLICLLSILAYLSFRF-EWRLASGALLALLHDVILV 169
             I  +S VG+ V  ++ +    A+   L++I  Y+  RF +W+ +  +++AL HD + V
Sbjct: 794 FAITGSSKVGATVADDIKNSSMEAMFFALVAIFLYILLRFRKWQYSLASIIALAHDTLFV 853

Query: 170 LGFFAITQ-----MEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQQTPTADINDQ 224
           +  FAI        E +    AA+L V+GYS+ND++I+ DRIRE +  +  +    + + 
Sbjct: 854 VAAFAIASAFGATFEIDQVFIAAMLTVIGYSINDTVIVFDRIRENITNRGTSKLVKMFND 913

Query: 225 AIIATFSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIGT 278
           AI  T +RT++TS TTL+ +  L + GG  L+GF+ A+F+G++ GT+SSI I T
Sbjct: 914 AINQTMARTLITSFTTLIVVIVLLIFGGEVLRGFSFALFVGVLVGTYSSIYIAT 967



 Score = 70.1 bits (170), Expect = 2e-16
 Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 17/179 (9%)

Query: 113 IVSNSMVGSQVGQELIDQG----GLALLICLLSILAYLSFRFEWRLASGALLALLHDVIL 168
           IV  +++G  +G+E   QG       L+I +L ++AY +     +    A+ AL+ ++  
Sbjct: 477 IVEEAIIGPTLGKEAQAQGINSMVAGLVIVVLFMIAYYA-----KGGFVAIAALVFNIFF 531

Query: 169 VLGFFAITQMEFNLTVFAAVLAVLGYSLNDSIIISDRIRELLLAKQ---QTPTADINDQA 225
           +LG  A       L   A ++  +G S++ +++I +RI+E L A     Q  T+  N   
Sbjct: 532 ILGILAQLGTALTLPGIAGIVLTIGMSIDANVLIFERIKEELAAGAGLLQAITSGYNK-- 589

Query: 226 IIATFSRTMVTSGTTLMTISALWLMGGAPLQGFAIAMFIGIISGTWSSISIGTVLPEWL 284
               FS  + ++ TT +T + L+ +G  P++GFAI + IGI S  +S++ I  V+  W+
Sbjct: 590 ---AFSAILDSNVTTFLTGAILYALGQGPVKGFAIVLMIGIASSFFSAVFITRVIVYWM 645