Pairwise Alignments

Query, 591 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., Polyhydroxyalkanoic acid synthase from Variovorax sp. SCN45

 Score =  419 bits (1076), Expect = e-121
 Identities = 228/578 (39%), Positives = 328/578 (56%), Gaps = 34/578 (5%)

Query: 33  SPLNKAMQEVNLEDSLKFFEQAANQPAALLKVQ-TQWWEQQLQIWQKV-------VLESK 84
           +P  +AM E     +L+ F+Q+A Q AA   V  T  W+       K+       +   K
Sbjct: 12  APFQQAMTE-GWTKALEAFQQSATQGAAAFNVGGTPLWQMPQMSPSKLPELPKLSIDPEK 70

Query: 85  IQSIMEA----------------EKGDKRFSHEAWQQDPFFNFIKQSYLLFSKTYLDTIN 128
           +QSI +                  +GDKRF+ EAW  +P   F    YLL  +T L+   
Sbjct: 71  LQSIQQQYVAEATELWRRGFDAKPEGDKRFASEAWGSNPLSAFSAAVYLLNGRTMLNMAE 130

Query: 129 AIEGLDEKAKERILFFSRQMINALSPSNFIATNPELLRLTLEKNGENLIAGLEQLKEDVA 188
           AI+  DEK K R+ F   Q + A SPSN +A N E  +  +E  GE++  G++ L  DV 
Sbjct: 131 AIDA-DEKTKARMRFAVEQWMAASSPSNSLAFNAEAQKKAIETQGESIAKGIQNLLNDVK 189

Query: 189 SSADILKIRMTNNNAFRLGEDVANTPGEVVFKNEVFELIQYKPLTEQVAVTPLLIVPPFI 248
                  + MT+ +AF +G +VA T G VVF+N+ F+L++YKPLT +V   P L+VPP I
Sbjct: 190 QG----HLSMTDESAFEVGRNVATTEGAVVFENDYFQLLEYKPLTAKVHERPFLLVPPCI 245

Query: 249 NKYYILDLREKNSMVRWLVEQGHSVFMISWRNPGAAQAQLNFEDYVLEGVVKAVNAIESI 308
           NK+YILDL+ +NS++R+  EQGH VF++SWRNP  +  +  ++DY+    +KA++ ++ I
Sbjct: 246 NKFYILDLQPENSLIRYANEQGHRVFVVSWRNPDESMDKATWDDYIENAAIKAIHTVQEI 305

Query: 309 TGQEQINAAGYCIGGTVLATTIAYYAAKRMKKRIKTASFFTTLLDFSQPGEVGAYINDTI 368
           +G +QIN  G+C+GGT+L+T +A  AA R +K   + +  TT LDFS  G +  ++++ +
Sbjct: 306 SGSKQINTLGFCVGGTILSTALAVLAA-RGEKPAASVTLLTTFLDFSDTGILDIFVDEAM 364

Query: 369 IRAIELQNNAKGYMDGRSLSVTFSLLRENSLYWNYYVDNYLKGQSPVDFDLLYWNSDSTN 428
           ++  E+Q    G + G  L+ TFS LR N L WNY V NYLKG++P  FDLLYWNSD+TN
Sbjct: 365 VQYREMQLGKGGLLPGGDLASTFSFLRPNDLVWNYVVGNYLKGETPPPFDLLYWNSDATN 424

Query: 429 VAGACHNFLLRELYLENKLVQDKGVKVGGVWIDLDKIKVPSYFISTKEDHIALWQGTYRG 488
           + G  + + LR  Y ENKL +   + V G  IDL  I +P+Y   ++EDHI    G Y  
Sbjct: 425 LPGPFYAWYLRNTYHENKLAKPNALTVCGEKIDLGSIDIPAYIYGSREDHIVPIGGAYAS 484

Query: 489 ALRTGGNKTFVLGESGHIAGIVNHPDKRKYGYWVND--TLDDSAEDWLETAQHREGSWWV 546
                G K FV+G SGHIAG++N P K+K  +W+ +      +  +WL  AQ   GSWW 
Sbjct: 485 TQLLPGKKRFVMGASGHIAGVINPPAKKKRSHWIREDGKFPKTQAEWLSGAQEHPGSWWT 544

Query: 547 HWNEWLNGFADGSKVEPYPLGNAD-YPVLYSAPGEYVK 583
            W +WL G A      P   GN   Y  +  APG YVK
Sbjct: 545 DWAQWLKGHAGKQIAAPKAYGNGKAYKAIEPAPGRYVK 582