Pairwise Alignments

Query, 591 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 553 a.a., Polyhydroxyalkanoic acid synthase from Variovorax sp. SCN45

 Score =  309 bits (792), Expect = 2e-88
 Identities = 176/494 (35%), Positives = 277/494 (56%), Gaps = 12/494 (2%)

Query: 95  DKRFSHEAWQQDPFFNFIKQSYLLFSKTYLDTINAIEGLDEKAKERILFFSRQMINALSP 154
           D R + + W   PF  + ++++    +  L+   A+ G+D   +E + F  RQ +  +SP
Sbjct: 63  DPRLAADDWVPWPFCMY-REAFEAGGRRLLELTRAVPGVDRHHEELVAFTVRQWLEMVSP 121

Query: 155 SNFIATNPELLRLTLEKNGENLIAGLEQLKEDVASSADILKIRMTNNNAFRLGEDVANTP 214
           +NF ATNP++L+ T    G NL+ G  Q  ED+   A  +     + +AFR G +VA TP
Sbjct: 122 ANFPATNPQVLKKTAASAGMNLLTGAVQGMEDLYRGASGMP--PVDADAFRPGYEVALTP 179

Query: 215 GEVVFKNEVFELIQYKPLTEQVAVTPLLIVPPFINKYYILDLREKNSMVRWLVEQGHSVF 274
           G+V+ +NE+ ELIQY P T  V   PLL++  +I KYY+LDL   NS++R+LV QGH+VF
Sbjct: 180 GKVILRNELVELIQYAPATPTVHAEPLLLLSAWIMKYYVLDLSPHNSLIRYLVGQGHTVF 239

Query: 275 MISWRNPGAAQAQLNFEDYVLEGVVKAVNAIESITGQEQINAAGYCIGGTVLATTIAYYA 334
            +SW+NPGA+ A L  +DY+  G+  +++A+E++    +++A GYC+GGT++A   A  A
Sbjct: 240 AVSWKNPGASGAGLGMDDYLRLGIRASLDAVETVLPGHRVHAVGYCLGGTLMAIAAAAMA 299

Query: 335 AKRMKKRIKTASFFTTLLDFSQPGEVGAYINDTIIRAIELQNNAKGYMDGRSLSVTFSLL 394
             R   R+ + S      DF++PGE+G +I+++ +  +E     +G++    ++  F  L
Sbjct: 300 RDR-DDRLASLSLLAAQTDFTEPGEIGLFIDESQLAFLEDIMAHQGFLGATQMAAAFQSL 358

Query: 395 RENSLYWNYYVDNYLKGQSPVDFDLLYWNSDSTNVAGACHNFLLRELYLENKLVQDKGVK 454
           R   L W   V ++L G+ P   DL+ WN+D T +    H   LR L+L+N L +   + 
Sbjct: 359 RPGELVWAPLVRSWLLGERPALNDLMAWNADGTRMPYRMHADYLRSLFLDNALAEGHYL- 417

Query: 455 VGGVWIDLDKIKVPSYFISTKEDHIALWQGTYRGALRTGGNKTFVLGESGHIAGIVNHPD 514
           V G  + L  I VP + + T+ DH+A W+  Y+  L    + +FVL E GH AGIV+ P 
Sbjct: 418 VDGRPVSLGDIDVPVFLLGTRTDHVAPWRSVYKFNLLCDSDVSFVLTEGGHNAGIVSEPG 477

Query: 515 KRKYGYWVNDTLDDSA----EDWLETAQHREGSWWVHWNEWLNGFADGSKVEPYPLG--N 568
                Y +       A    +++LE ++  EGSWW  + +WL   + G K  P P+G   
Sbjct: 478 HPHRSYRILRRRRHDAYVAPDEFLELSREVEGSWWPGFQQWLAAHS-GPKRRPPPMGAPR 536

Query: 569 ADYPVLYSAPGEYV 582
              P L SAPG YV
Sbjct: 537 RGLPPLCSAPGTYV 550