Pairwise Alignments

Query, 591 a.a., class I poly(R)-hydroxyalkanoic acid synthase from Vibrio cholerae E7946 ATCC 55056

Subject, 619 a.a., poly-beta-hydroxybutyrate synthase from Agrobacterium fabrum C58

 Score =  438 bits (1126), Expect = e-127
 Identities = 230/569 (40%), Positives = 339/569 (59%), Gaps = 20/569 (3%)

Query: 23  EVEQSKAAVNSPLNKAMQEVNLEDSLKFFEQAANQPAALLKVQTQWWEQQLQIWQKVVLE 82
           E+ Q+ A   + L K + +V         E    +P   L+ QT        +W K + +
Sbjct: 60  EIPQASADPVTDLVKTLSDVA--------EYWMAEPKRSLEAQTHLLSSYYDLWTKSLAQ 111

Query: 83  ------SKIQSIME---AEKGDKRFSHEAWQQDPFFNFIKQSYLLFSKTYLDTINAIEGL 133
                 S  +++ E   A++  KRF+   WQ +PFF+F+ ++Y          +   +GL
Sbjct: 112 FSNDADSPPENVAESGPAQRRSKRFADADWQTNPFFDFLLKAYQTTVGFADRMVTEADGL 171

Query: 134 DEKAKERILFFSRQMINALSPSNFIATNPELLRLTLEKNGENLIAGLEQLKEDVASSADI 193
           DE  + + LF+ RQ+  ALSP+NF+ TNP++ R T+  +G NL+ G+ QL EDVA+    
Sbjct: 172 DEHTRTKALFYMRQVTEALSPANFVFTNPQVFRETVASSGANLVKGMAQLAEDVAAGNGH 231

Query: 194 LKIRMTNNNAFRLGEDVANTPGEVVFKNEVFELIQYKPLTEQVAVTPLLIVPPFINKYYI 253
           LK+R T+ + F +G+++A TPG+VV K+ + E+I Y P TE+V   PLLIVPP+INK+YI
Sbjct: 232 LKLRQTDYSKFVIGQNIAVTPGKVVAKSPLCEIIHYAPTTEKVFKPPLLIVPPWINKFYI 291

Query: 254 LDLREKNSMVRWLVEQGHSVFMISWRNPGAAQAQLNFEDYVLEGVVKAVNAIESITGQEQ 313
           LDL  + S V W +EQGHSVFM+SW NP A  A   ++DY+ EG+  A++ IE  TG++Q
Sbjct: 292 LDLNPQKSFVGWCLEQGHSVFMVSWINPDAGLANKGWDDYINEGIDFALDTIEERTGEKQ 351

Query: 314 INAAGYCIGGTVLATTIAYYAAKRMKKRIKTASFFTTLLDFSQPGEVGAYINDTIIRAIE 373
           INA GYC+GGT+L++ +A + A++  +RI++A+      DF   G++  +I++  + A++
Sbjct: 352 INAIGYCVGGTLLSSALALH-AQQGNERIRSATLLAAQTDFIHAGDLKVFIDEGQLAALD 410

Query: 374 LQNNAKGYMDGRSLSVTFSLLRENSLYWNYYVDNYLKGQSPVDFDLLYWNSDSTNVAGAC 433
               A GY+DG  ++  F++LR + L W Y VDNYL+G  P+ FDLLYWNSDST V  A 
Sbjct: 411 KHMQAVGYLDGSIMATVFNMLRASDLIWPYVVDNYLRGAEPLPFDLLYWNSDSTRVTAAS 470

Query: 434 HNFLLRELYLENKLVQDKGVKVGGVWIDLDKIKVPSYFISTKEDHIALWQGTYRGALRTG 493
           H+F LR  YLEN L +   ++V G  I+L  I +P Y ++T++DHIA  +  + GA   G
Sbjct: 471 HSFYLRNCYLENNLARGL-MRVAGKRINLGDITIPVYDLATRDDHIAPAKSVFTGAALFG 529

Query: 494 GNKTFVLGESGHIAGIVNHPDKRKYGYWVNDTLDDSAEDWLETAQHREGSWWVHWNEWLN 553
           G   FVLG SGHIAG++N P   KY YW   +     E W   A   +GSWW+HW  W+ 
Sbjct: 530 GTVEFVLGASGHIAGVINPPQLEKYQYWTGPSPSGDFEAWQAAATAHKGSWWMHWQNWIE 589

Query: 554 GFADGSKVEPYPLGNADYPVLYSAPGEYV 582
                 KV+    G+   PVL  APG YV
Sbjct: 590 S-QSTEKVKARKPGDGKRPVLGDAPGTYV 617