Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 291 a.a., Spermidine/putrescine transport system permease protein PotB from Xanthobacter sp. DMC5

 Score = 78.2 bits (191), Expect = 5e-19
 Identities = 64/266 (24%), Positives = 120/266 (45%), Gaps = 21/266 (7%)

Query: 152 LISIILLIVIFIVYPSIAIFLPMFKD-----------DMGNWTAWQFMTILSQSHTLTVI 200
           L+ I ++  I  ++P + +    F++           ++  WT       L+ S TL +I
Sbjct: 24  LLPIAVVNAIGFLWPVVNLLKMSFREAQASGALGAGYNLDTWT-----NALTDSFTLELI 78

Query: 201 YNSIALGIAVGVGATFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLG 260
            NS+ + + + V         A+Y  R       +  V  + P++T   +   G   +L 
Sbjct: 79  TNSVGVSLLITVLTLIASYPIALYLHRSTGTWRTMLMVLVVAPLLTSAVVRTYGWIAILS 138

Query: 261 RSGYITELMVDGFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYT 320
             G +   ++     +    ++  TG+ +       P   + L      L P LEEA+ T
Sbjct: 139 DRGLVANALMALGMAEPPRLMFNLTGVVIGLTEILMPYMILALLSGFGRLDPRLEEAALT 198

Query: 321 LKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGGS-FDVLATQIYFYIAG 379
           L A+  +TF+ +++PL  P +A   L+ FV +++ F  P +LGG    +LAT+IY   A 
Sbjct: 199 LGASPLKTFWRVVLPLTAPGMALGGLLCFVLAISSFVTPKLLGGGRVFLLATEIYDQ-AI 257

Query: 380 AQLDYASASTLGSVLLL---FSLAIF 402
             L++  A+ L  ++L+    SLA++
Sbjct: 258 VTLNWPLAAALSMIVLVVFGISLALY 283



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 73/299 (24%), Positives = 117/299 (39%), Gaps = 48/299 (16%)

Query: 392 SVLLLFSLAIFVVQYLWIGQRSYVTISGKAYRGDVQEMPASLKLGVTVTLYAWMIFNVLL 451
           S LLL    +  + +LW      V +   ++R    E  AS  LG    L  W      L
Sbjct: 21  SALLLPIAVVNAIGFLW----PVVNLLKMSFR----EAQASGALGAGYNLDTW---TNAL 69

Query: 452 YGSIFFGSFTVNWGVDYTLTFKNYLNLFGNGM----SDGAWPSLITTMIYAGVAAPITAL 507
             S      T + GV   +T    +  +   +    S G W     TM+   V AP    
Sbjct: 70  TDSFTLELITNSVGVSLLITVLTLIASYPIALYLHRSTGTW----RTMLMVLVVAP---- 121

Query: 508 FGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFNDAP---IYLTGTAAIV 564
              L+   VVR          +  +   +  G VA     L   + P     LTG    V
Sbjct: 122 ---LLTSAVVRT---------YGWIAILSDRGLVANALMALGMAEPPRLMFNLTG----V 165

Query: 565 VISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYIILPLLRPAILSTLVY 624
           VI +    +P  I + ++G G+LD  L+EA+L+L AS L+T   ++LPL  P +    + 
Sbjct: 166 VIGLTEILMPYMILALLSGFGRLDPRLEEAALTLGASPLKTFWRVVLPLTAPGMALGGLL 225

Query: 625 SFVRAMTTVSAIIFLVTPETRVATSYILNRVEDGEYGIAIAYGSVLIVVMLAIILLFDL 683
            FV A+++       VTP+        L   E  +  I      +   + + ++++F +
Sbjct: 226 CFVLAISS------FVTPKLLGGGRVFLLATEIYDQAIVTLNWPLAAALSMIVLVVFGI 278