Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 272 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score = 78.6 bits (192), Expect = 4e-19
 Identities = 62/224 (27%), Positives = 106/224 (47%), Gaps = 13/224 (5%)

Query: 185 WQFMTILSQSHTLTVIYNSIALGIAVGVGATFFGLIFAIYTTR--IAKRSAFIARVFSIL 242
           WQ   +LS +  L  +  ++ L + V + A   G I  ++  R     RSA +A +    
Sbjct: 46  WQ---VLSSAQYLGSLGQTLVLAVVVTLVALVIGGISGVFLARQQFFGRSALVALL--TF 100

Query: 243 PIVTPPFIVGLGVTLMLGRSGYITELMVDGFGLQKTNWLYGFT--GIWLAQVLAFAPMSF 300
           P+  P  +VG  V L+ GR G +  L   G  L    W++ ++  G+++  +    P   
Sbjct: 101 PLAFPGVVVGFLVILLAGRQGLLASL---GLQLAGERWIFAYSLAGLFVGYLYFSIPRVI 157

Query: 301 MILDGALKSLHPSLEEASYTLKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFSNPL 360
           + +  A +SL  SLEEA+++L A  ++    +I+P L PALA+   I F  S+  F    
Sbjct: 158 LTVMAACESLDRSLEEAAHSLGAGHWRVVCDVIVPGLAPALASCGAICFATSMGAFGTAF 217

Query: 361 VLGGSFDVLATQIYFYIAGAQLDYASASTLGSVLLLFSLAIFVV 404
            LG   +V    IY        ++A A+ L  VL + + A+ ++
Sbjct: 218 TLGTRLNVTPVAIYNVFTN-YANFAVAAALSVVLGVVTWAVLLL 260



 Score = 57.0 bits (136), Expect = 1e-12
 Identities = 61/219 (27%), Positives = 91/219 (41%), Gaps = 27/219 (12%)

Query: 490 SLITTMIYAGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILA 549
           SL  T++ A V   +  + G +    + RQQF+G+  +        A PG V G   IL 
Sbjct: 57  SLGQTLVLAVVVTLVALVIGGISGVFLARQQFFGRSALVALLTFPLAFPGVVVGFLVILL 116

Query: 550 FN------DAPIYLTGTAAIVVISM-------VMRNVPVGIRSGIAGLGQLDKSLDEASL 596
                      + L G   I   S+       +  ++P  I + +A    LD+SL+EA+ 
Sbjct: 117 AGRQGLLASLGLQLAGERWIFAYSLAGLFVGYLYFSIPRVILTVMAACESLDRSLEEAAH 176

Query: 597 SLRASSLQTIRYIILPLLRPAILSTLVYSFVRAMTTVSAIIFL-----VTPET--RVATS 649
           SL A   + +  +I+P L PA+ S     F  +M        L     VTP     V T+
Sbjct: 177 SLGAGHWRVVCDVIVPGLAPALASCGAICFATSMGAFGTAFTLGTRLNVTPVAIYNVFTN 236

Query: 650 YILNRVEDGEYGIAIAYGSVLIVVMLAIILLFDLLVGEA 688
           Y         + +A A   VL VV  A++LL   LV  A
Sbjct: 237 Y-------ANFAVAAALSVVLGVVTWAVLLLTRRLVKNA 268