Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., ABC transporter, permease protein 1 (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 84.3 bits (207), Expect = 7e-21
 Identities = 55/254 (21%), Positives = 117/254 (46%), Gaps = 8/254 (3%)

Query: 155 IILLIVIFIVYPSIAIFLPMFKDDMGN-----WTAWQFMTILSQSHTLTVIYNSIALGIA 209
           ++LL++ F+    + + L +   + G      WT   + +I++  +   V+  ++ LG  
Sbjct: 16  LLLLLLAFVAPVLLMVPLSLHPYEPGTGISAGWTLANYTSIVTDEYYREVVVRTLVLGFG 75

Query: 210 VGVGATFFGLIFAIYTTRIAKRSAFIARVFSILPIVTPPFIVGLGVTLMLGRSGYITELM 269
           V       G   A Y      R      +  I P++    +   G   +L   G +  L+
Sbjct: 76  VTAICLLLGYPLAYYIANAGPRMRLALTMLVIFPMLLNLVVRSFGWIALLANRGLVNNLL 135

Query: 270 VD-GFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGALKSLHPSLEEASYTLKANRYQT 328
           +D G   +    ++   G+ +     F P   ++L  A++++   ++ A+YTL A+R + 
Sbjct: 136 IDIGLIERPIKMMFNLFGLLVGMSHIFLPFMVLMLVPAIQAISKDVQAAAYTLAASRLRV 195

Query: 329 FFGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGG-SFDVLATQIYFYIAGAQLDYASA 387
           F+ I +P+  P + +  +++FV +++    P +LGG ++ V+AT IY       LD+ + 
Sbjct: 196 FWSITLPMSAPGILSGSILVFVLTISALVTPRMLGGPTYKVMATLIYDDFL-QTLDWPAG 254

Query: 388 STLGSVLLLFSLAI 401
           + +   L   +LA+
Sbjct: 255 AAMSFALTALTLAV 268



 Score = 34.7 bits (78), Expect = 6e-06
 Identities = 37/172 (21%), Positives = 71/172 (41%), Gaps = 5/172 (2%)

Query: 510 LLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILAFNDAPIYLTGTAAIVVISMV 569
           L +  +V+        V  F  +   A  G V  +   +   + PI +      +++ M 
Sbjct: 100 LALTMLVIFPMLLNLVVRSFGWIALLANRGLVNNLLIDIGLIERPIKMMFNLFGLLVGMS 159

Query: 570 MRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIRYIILPLLRPAILSTLVYSFVRA 629
              +P  +   +  +  + K +  A+ +L AS L+    I LP+  P ILS  +  FV  
Sbjct: 160 HIFLPFMVLMLVPAIQAISKDVQAAAYTLAASRLRVFWSITLPMSAPGILSGSILVFVLT 219

Query: 630 MTTVSAIIFLVTPETRVATSYILN---RVEDGEYGIAIAYGSVLIVVMLAII 678
           ++ +     L  P  +V  + I +   +  D   G A+++   L  + LA+I
Sbjct: 220 ISALVTPRMLGGPTYKVMATLIYDDFLQTLDWPAGAAMSF--ALTALTLAVI 269