Pairwise Alignments

Query, 700 a.a., iron ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 285 a.a., ABC transporter, membrane spanning protein from Agrobacterium fabrum C58

 Score = 91.7 bits (226), Expect = 4e-23
 Identities = 53/205 (25%), Positives = 111/205 (54%), Gaps = 13/205 (6%)

Query: 498 AGVAAPITALFGLLIAYVVVRQQFYGKKVIEFSTMLCFAVPGTVAGVSYILA-------- 549
           A +AA + A+FG+++A+V+ R +F G++ ++    L FA+P  VAG++            
Sbjct: 75  AFIAALVNAVFGVIVAWVLTRYRFPGRRFVDAIVDLPFALPTAVAGIALTTLYANRGWVG 134

Query: 550 --FNDAPIYLTGTAAIVVISMVMRNVPVGIRSGIAGLGQLDKSLDEASLSLRASSLQTIR 607
             F    I +  T   +VI+++   +P  +R+    + ++D+ ++E + +L A+  QTI 
Sbjct: 135 SLFEPFGIKIAFTPTGIVIALIFIGLPFVVRTVQPVMEEIDRQVEEVAATLGANRFQTIT 194

Query: 608 YIILPLLRPAILSTLVYSFVRAMTTVSAIIFL---VTPETRVATSYILNRVEDGEYGIAI 664
            ++LP L PAIL+    +F R +    ++IF+   +   + +A   I+ R+E+  Y  A 
Sbjct: 195 RVLLPSLTPAILTGFALAFARGVGEYGSVIFIAGNIPYVSEIAPLLIVIRLEEFNYAAAT 254

Query: 665 AYGSVLIVVMLAIILLFDLLVGEAR 689
              ++++++  A++ L +L+   +R
Sbjct: 255 GIATIMLIISFAMLFLINLIQAWSR 279



 Score = 77.4 bits (189), Expect = 8e-19
 Identities = 49/217 (22%), Positives = 99/217 (45%), Gaps = 6/217 (2%)

Query: 187 FMTILSQSHTLTVIYNSIALGIAVGVGATFFGLIFAIYTTRIAKRSAFIARVFSILPIVT 246
           F+ I + S TL  +  S        +    FG+I A   TR              LP   
Sbjct: 55  FIAIATDSRTLNALRVSFGTAFIAALVNAVFGVIVAWVLTRYRFPGRRFVDAIVDLPFAL 114

Query: 247 PPFIVGLGVTLMLGRSGYITELMVDGFGLQKTNWLYGFTGIWLAQVLAFAPMSFMILDGA 306
           P  + G+ +T +    G++  L  + FG++     +  TGI +A +    P     +   
Sbjct: 115 PTAVAGIALTTLYANRGWVGSLF-EPFGIKIA---FTPTGIVIALIFIGLPFVVRTVQPV 170

Query: 307 LKSLHPSLEEASYTLKANRYQTFFGIIMPLLKPALANSFLIIFVQSLADFSNPLVLGGSF 366
           ++ +   +EE + TL ANR+QT   +++P L PA+   F + F + + ++ + + + G+ 
Sbjct: 171 MEEIDRQVEEVAATLGANRFQTITRVLLPSLTPAILTGFALAFARGVGEYGSVIFIAGNI 230

Query: 367 DVLA--TQIYFYIAGAQLDYASASTLGSVLLLFSLAI 401
             ++    +   I   + +YA+A+ + +++L+ S A+
Sbjct: 231 PYVSEIAPLLIVIRLEEFNYAAATGIATIMLIISFAM 267