Pairwise Alignments

Query, 344 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 348 a.a., putative protein from Xanthobacter sp. DMC5

 Score = 58.2 bits (139), Expect = 3e-13
 Identities = 82/361 (22%), Positives = 148/361 (40%), Gaps = 49/361 (13%)

Query: 3   VNAKRTLLALSVLGSMMTAPLVHAEGRLVVYCSATNAMCEAGTKAFAEKYNVN------T 56
           +NA      L +L + + A    AE  L V  + +    E  TKA  E +         T
Sbjct: 1   MNAAHKFGTLCLLAAGLMAGPAAAETNLTVM-AYSGLFQERYTKAVLEPFMKAHPDIKVT 59

Query: 57  SFVRNGSGSTLAKIDAEKNNPRADVWYGGTLDPQSQAG-EMDLLQAYQSPELANIMEGFR 115
            F    S + L  + A+K  P+ADV         S+AG +  L        + N+     
Sbjct: 60  FFPLPSSAAMLGNLRAQKAAPQADVVIMDV--SVSKAGTDEGLFTKIDETNIPNV----- 112

Query: 116 DPAKRKGNYSSAVYMGILGFGVNTERL-----AQKGIPIPRCWADLTKPEYKGEIQISD- 169
                K  Y +A    + G GV  + L     A++    P+ W ++ K  YKG++ I   
Sbjct: 113 -----KDLYPNARIPSVAGVGVTFDNLVLLYNAEQVKEAPKSWMEMAKAPYKGKVVIPGV 167

Query: 170 PQSSGTAYTALATFIQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNS-----------A 218
           P   G     L   + L       +Y   +DK ++   +  + P+  +            
Sbjct: 168 PDIQG-----LGLVLILNKANGGTDYLASVDKGLAAVAE--IAPNVQTWEPKPEVYAPII 220

Query: 219 RGEVAIGIGFLHDYSLE-QAKGAPLELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWV 277
            G+ A+G+G+     +  +  G  ++   P EGT +++  ++++ GA   + AK FV++ 
Sbjct: 221 TGQAALGVGYNARAQVNSEQSGGKIKATIPQEGTIFQINTINLVAGAPAAEAAKTFVNYA 280

Query: 278 LSKEGQEVAWKQGDSYQILTNTQAEQSPNALDPKTLKLINYDM--ETYGSSDERKRLITK 335
           LS E Q+   +    +   TN++AE +  ALD   +K ++  M  +    +  R ++  +
Sbjct: 281 LSPEAQKSFTE--TMFYAPTNSKAEITGAALDRTAVKNLDKVMAVDWIALAQVRDKIAEQ 338

Query: 336 W 336
           W
Sbjct: 339 W 339