Pairwise Alignments

Query, 344 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 343 a.a., Spermidine/putrescine-binding periplasmic protein from Xanthobacter sp. DMC5

 Score = 54.3 bits (129), Expect = 4e-12
 Identities = 68/285 (23%), Positives = 114/285 (40%), Gaps = 11/285 (3%)

Query: 3   VNAKRTLLALSVLGSMMTAPLVHAEGRLVVYC---SATNAMCEAGTKAFAEKYNVNTSFV 59
           +N K   L L+ L + +  P   AE +LVV     S  + + EA    F +   V   ++
Sbjct: 1   MNGKIVALGLA-LAAFVAGPASAAE-KLVVSTWGGSFRDLIAEAIASKFTKDTGVEVEYI 58

Query: 60  RNGSGSTLAKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPELANIMEGFRDPAK 119
             G+   L K    K +P +D+ +         A + DL +     ++ N  +    P  
Sbjct: 59  TGGTIDRLNKAKLAKGSPESDITFTTAHVGWLYAND-DLFETLDLSKMPNASKLV--PQA 115

Query: 120 RKGNYSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQISDPQSSGT-AYT 178
           +   Y    +  +   G   + L  K I     WADL  PE KG +   D   S   A +
Sbjct: 116 KVSPYHIGAWAYVYTIGYRPD-LTPKNINFSS-WADLWNPELKGMLAAPDFDPSHIIAVS 173

Query: 179 ALATFIQLWDEPTAFEYFKKLDKNVSQYTKSGVTPSRNSARGEVAIGIGFLHDYSLEQAK 238
           AL       D     +    L  N   +  +     +  A GE  + I    +     A+
Sbjct: 174 ALLAGGSPADWQKGEQKLLALKPNFKAFYTNDANSQQLIATGETPVQIMLSMNAYYMIAQ 233

Query: 239 GAPLELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKEGQ 283
           G P++L+ P EG    +  ++I+KG++N + A+ F++  L  E Q
Sbjct: 234 GVPIKLVIPKEGGVLGIDTMAIMKGSKNRELAEKFINTALDPEVQ 278