Pairwise Alignments

Query, 344 a.a., iron(III) ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 344 a.a., ABC transporter, substrate-binding protein (cluster 1, maltose/g3p/polyamine/iron) from Variovorax sp. SCN45

 Score = 61.2 bits (147), Expect = 4e-14
 Identities = 79/277 (28%), Positives = 113/277 (40%), Gaps = 19/277 (6%)

Query: 47  AFAEKYNVNTSFVRNGSGSTLAKIDAEKNNPRADVWYGGTLDPQSQAGEMDLLQAYQSPE 106
           +F +K     +     S    A I A       DV Y       SQ     LL+     +
Sbjct: 50  SFEKKTGAKVALKLGSSSQFAASIRATGGKSDFDVVYIDN-SLASQLKNEKLLETIDKSK 108

Query: 107 LANIMEGFRDPAKRKGNYSSAVYMGILGFGVNTERLAQKGIPIPRCWADLTKPEYKGEIQ 166
           LAN  E       + G Y   V+M   G  V      Q   P P  WADL KPEY G + 
Sbjct: 109 LANAAEVSPRALDKDGQY--VVFM--TGATVIVYDTKQIKTP-PTSWADLAKPEYDGRLA 163

Query: 167 ISDPQ-SSGTAYTALATFIQ---LWDEPTAFEYFKKLDKN-VSQYTKSGVTPSRNSARGE 221
           I D   +SG+ +      ++   L +    F   K + K+ V+ YT++    S    R E
Sbjct: 164 IGDISGTSGSQFLMALNRMKGGTLANMDAGFAAIKPIAKSSVTLYTQADQIVSLFE-RQE 222

Query: 222 VAIGIGFLHDYSLEQAKGAPLELISPCEGTGYELGGVSIIKGARNLDNAKLFVDWVLSKE 281
           +A  + +         KG PL ++ P EG    L  + I KGA++   A  ++D VLSKE
Sbjct: 223 IAAAVWYPDRAGSAIDKGLPLAIVYPKEGAVGILPALVIPKGAKSPALALKYIDEVLSKE 282

Query: 282 GQEVAWKQGDSYQILTNTQAEQSPNALDPKTLKLINY 318
           GQ    ++   Y    NTQ +     L  K  K++ Y
Sbjct: 283 GQTCFAER--KYAGPVNTQVK-----LSDKAAKIVPY 312